Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S2P59780 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S2P59780 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.51□□□□□ -0.41
AP3S2P59780 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.51□□□□□ -0.41
AP3S2P59780 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 AC004461.2-201ENST00000629517 803 ntBASIC12.51□□□□□ -0.41
AP3S2P59780 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
AP3S2P59780 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.51□□□□□ -0.41
AP3S2P59780 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
AP3S2P59780 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AP3S2P59780 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.5□□□□□ -0.41
AP3S2P59780 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.5□□□□□ -0.41
AP3S2P59780 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
AP3S2P59780 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 USP17L6P-201ENST00000382470 1197 ntBASIC12.5□□□□□ -0.41
AP3S2P59780 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 AC007967.2-201ENST00000432613 625 ntBASIC12.5□□□□□ -0.41
AP3S2P59780 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 GAPDHP40-201ENST00000505218 1006 ntBASIC12.5□□□□□ -0.41
AP3S2P59780 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.5□□□□□ -0.41
AP3S2P59780 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
AP3S2P59780 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.5□□□□□ -0.41
AP3S2P59780 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.5□□□□□ -0.41
AP3S2P59780 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.5□□□□□ -0.41
AP3S2P59780 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
AP3S2P59780 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 AC107375.1-201ENST00000564464 2231 ntBASIC12.5□□□□□ -0.41
AP3S2P59780 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
AP3S2P59780 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AP3S2P59780 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.49□□□□□ -0.41
AP3S2P59780 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
AP3S2P59780 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
AP3S2P59780 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.49□□□□□ -0.41
AP3S2P59780 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
AP3S2P59780 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms