Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 HSPA8P5-201ENST00000456928 2069 ntBASIC14.78□□□□□ -0.04
CDH4P55283 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH4P55283 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH4P55283 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH4P55283 CCT8L1P-201ENST00000465400 1674 ntBASIC14.77□□□□□ -0.04
CDH4P55283 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH4P55283 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CDH4P55283 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH4P55283 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.77□□□□□ -0.04
CDH4P55283 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.77□□□□□ -0.04
CDH4P55283 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.77□□□□□ -0.04
CDH4P55283 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CDH4P55283 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CDH4P55283 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CDH4P55283 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 RNA5SP359-201ENST00000364838 113 ntBASIC14.77□□□□□ -0.05
CDH4P55283 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH4P55283 AL133466.1-201ENST00000447582 150 ntBASIC14.77□□□□□ -0.05
CDH4P55283 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH4P55283 RN7SL530P-201ENST00000485097 298 ntBASIC14.77□□□□□ -0.05
CDH4P55283 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH4P55283 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.77□□□□□ -0.05
CDH4P55283 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 AL022334.2-201ENST00000610000 484 ntBASIC14.77□□□□□ -0.05
CDH4P55283 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH4P55283 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CDH4P55283 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CDH4P55283 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 AC007191.1-201ENST00000623179 2995 ntBASIC14.77□□□□□ -0.05
CDH4P55283 AC067750.1-201ENST00000608826 6545 ntBASIC14.77□□□□□ -0.05
CDH4P55283 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.77□□□□□ -0.05
CDH4P55283 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CDH4P55283 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH4P55283 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH4P55283 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH4P55283 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH4P55283 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH4P55283 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CDH4P55283 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH4P55283 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH4P55283 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH4P55283 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDH4P55283 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.76□□□□□ -0.05
CDH4P55283 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH4P55283 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH4P55283 AL353637.1-201ENST00000451571 732 ntBASIC14.76□□□□□ -0.05
CDH4P55283 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.76□□□□□ -0.05
CDH4P55283 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CDH4P55283 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH4P55283 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.76□□□□□ -0.05
CDH4P55283 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms