Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.15■□□□□ 0.02
CLCN4P51793 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN4P51793 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN4P51793 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCN4P51793 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN4P51793 OR5BD1P-201ENST00000532527 817 ntBASIC15.15■□□□□ 0.02
CLCN4P51793 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN4P51793 C2orf69P1-201ENST00000563532 1093 ntBASIC15.15■□□□□ 0.02
CLCN4P51793 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCN4P51793 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
CLCN4P51793 SIGLEC22P-201ENST00000599104 714 ntBASIC15.15■□□□□ 0.02
CLCN4P51793 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.15■□□□□ 0.02
CLCN4P51793 AC140113.1-201ENST00000603467 169 ntBASIC15.15■□□□□ 0.02
CLCN4P51793 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCN4P51793 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCN4P51793 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN4P51793 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN4P51793 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN4P51793 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN4P51793 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN4P51793 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLCN4P51793 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLCN4P51793 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN4P51793 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
CLCN4P51793 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN4P51793 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CLCN4P51793 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLCN4P51793 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 AC018442.1-201ENST00000421439 2061 ntBASIC15.14■□□□□ 0.01
CLCN4P51793 AGGF1P1-201ENST00000509500 2073 ntBASIC15.14■□□□□ 0.01
CLCN4P51793 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CLCN4P51793 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 MIR1227-201ENST00000408484 88 ntBASIC15.14■□□□□ 0.01
CLCN4P51793 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN4P51793 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN4P51793 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCN4P51793 AC068867.1-201ENST00000559855 150 ntBASIC15.14■□□□□ 0.01
CLCN4P51793 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN4P51793 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN4P51793 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.14■□□□□ 0.01
CLCN4P51793 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.14■□□□□ 0.01
CLCN4P51793 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN4P51793 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CLCN4P51793 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.14■□□□□ 0.01
CLCN4P51793 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.14■□□□□ 0.01
CLCN4P51793 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLCN4P51793 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN4P51793 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.13■□□□□ 0.01
CLCN4P51793 BCAS2P2-201ENST00000425064 674 ntBASIC15.13■□□□□ 0.01
CLCN4P51793 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.13■□□□□ 0.01
CLCN4P51793 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.13■□□□□ 0.01
CLCN4P51793 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN4P51793 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 AC026410.1-201ENST00000507366 1101 ntBASIC15.13■□□□□ 0.01
CLCN4P51793 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CLCN4P51793 AC005586.2-201ENST00000563946 837 ntBASIC15.13■□□□□ 0.01
CLCN4P51793 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN4P51793 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN4P51793 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
CLCN4P51793 AC126755.1-201ENST00000525846 6405 ntBASIC15.13■□□□□ 0.01
CLCN4P51793 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN4P51793 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms