Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBP50607 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBP50607 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBP50607 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBP50607 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBP50607 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBP50607 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TUBP50607 AC078875.1-201ENST00000431907 724 ntBASIC15.32■□□□□ 0.04
TUBP50607 AC006122.1-201ENST00000493323 440 ntBASIC15.32■□□□□ 0.04
TUBP50607 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBP50607 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBP50607 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBP50607 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBP50607 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 AC138627.1-207ENST00000641560 1006 ntBASIC15.32■□□□□ 0.04
TUBP50607 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBP50607 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 AC097376.2-205ENST00000610159 5334 ntBASIC15.32■□□□□ 0.04
TUBP50607 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TUBP50607 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBP50607 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBP50607 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TUBP50607 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBP50607 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TUBP50607 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TUBP50607 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TUBP50607 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TUBP50607 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBP50607 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBP50607 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TUBP50607 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TUBP50607 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TUBP50607 AL662890.1-201ENST00000396818 632 ntBASIC15.31■□□□□ 0.04
TUBP50607 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.31■□□□□ 0.04
TUBP50607 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.31■□□□□ 0.04
TUBP50607 CYP46A4P-201ENST00000414953 267 ntBASIC15.31■□□□□ 0.04
TUBP50607 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBP50607 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 SPTLC1P5-201ENST00000450718 252 ntBASIC15.31■□□□□ 0.04
TUBP50607 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.31■□□□□ 0.04
TUBP50607 IGHJ2P-201ENST00000454480 60 ntBASIC15.31■□□□□ 0.04
TUBP50607 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.31■□□□□ 0.04
TUBP50607 SCARNA21-201ENST00000517026 139 ntBASIC15.31■□□□□ 0.04
TUBP50607 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBP50607 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.31■□□□□ 0.04
TUBP50607 RBM8B-201ENST00000555532 525 ntBASIC15.31■□□□□ 0.04
TUBP50607 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBP50607 AC091544.8-201ENST00000619490 361 ntBASIC15.31■□□□□ 0.04
TUBP50607 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBP50607 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 AC144522.1-201ENST00000625111 1658 ntBASIC15.31■□□□□ 0.04
TUBP50607 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms