Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
CEACAM3P40198 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.92□□□□□ -0.5
CEACAM3P40198 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC11.92□□□□□ -0.5
CEACAM3P40198 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.92□□□□□ -0.5
CEACAM3P40198 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CEACAM3P40198 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 AC244107.1-201ENST00000442033 332 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 PFN1P12-201ENST00000455938 534 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 TUBB8P8-201ENST00000458717 1058 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 AC021723.1-201ENST00000486306 515 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 AC100850.1-201ENST00000506768 649 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 ACR-203ENST00000529621 708 ntTSL 5 BASIC11.92□□□□□ -0.5
CEACAM3P40198 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 AC027237.1-201ENST00000560942 655 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.92□□□□□ -0.5
CEACAM3P40198 MIR4259-201ENST00000584466 101 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 AC132192.2-201ENST00000596206 1147 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC11.92□□□□□ -0.5
CEACAM3P40198 AL023803.2-201ENST00000620080 638 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CEACAM3P40198 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CEACAM3P40198 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 AL139385.1-201ENST00000611744 3272 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 AC140479.7-201ENST00000636301 2332 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CEACAM3P40198 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC11.92□□□□□ -0.5
CEACAM3P40198 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.91□□□□□ -0.5
CEACAM3P40198 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AL354877.1-201ENST00000424412 413 ntBASIC11.91□□□□□ -0.5
CEACAM3P40198 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CEACAM3P40198 RIT1-205ENST00000539040 919 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AL583810.1-201ENST00000553344 1045 ntBASIC11.91□□□□□ -0.5
CEACAM3P40198 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.91□□□□□ -0.5
CEACAM3P40198 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms