Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
GRIK1P39086 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIK1P39086 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIK1P39086 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.29■□□□□ 0.04
GRIK1P39086 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
GRIK1P39086 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.29■□□□□ 0.04
GRIK1P39086 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GRIK1P39086 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GRIK1P39086 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.29■□□□□ 0.04
GRIK1P39086 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
GRIK1P39086 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
GRIK1P39086 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GRIK1P39086 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GRIK1P39086 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIK1P39086 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GRIK1P39086 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GRIK1P39086 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIK1P39086 PDIA3P2-201ENST00000428073 158 ntBASIC15.28■□□□□ 0.04
GRIK1P39086 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.28■□□□□ 0.04
GRIK1P39086 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIK1P39086 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIK1P39086 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.28■□□□□ 0.04
GRIK1P39086 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 MIR6074-201ENST00000612054 107 ntBASIC15.28■□□□□ 0.04
GRIK1P39086 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
GRIK1P39086 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 LINC01165-201ENST00000445190 1623 ntBASIC15.28■□□□□ 0.04
GRIK1P39086 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.28■□□□□ 0.04
GRIK1P39086 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GRIK1P39086 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GRIK1P39086 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.27■□□□□ 0.04
GRIK1P39086 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GRIK1P39086 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GRIK1P39086 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GRIK1P39086 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.27■□□□□ 0.04
GRIK1P39086 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GRIK1P39086 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.27■□□□□ 0.04
GRIK1P39086 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
GRIK1P39086 AC007274.2-201ENST00000421675 662 ntBASIC15.27■□□□□ 0.04
GRIK1P39086 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.27■□□□□ 0.04
GRIK1P39086 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.27■□□□□ 0.04
GRIK1P39086 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GRIK1P39086 RTN3P1-201ENST00000536295 711 ntBASIC15.27■□□□□ 0.04
GRIK1P39086 AC105129.2-201ENST00000559536 390 ntBASIC15.27■□□□□ 0.04
GRIK1P39086 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.27■□□□□ 0.04
GRIK1P39086 AL591471.1-201ENST00000621855 229 ntBASIC15.27■□□□□ 0.04
GRIK1P39086 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.27■□□□□ 0.03
GRIK1P39086 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.27■□□□□ 0.03
GRIK1P39086 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GRIK1P39086 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.27■□□□□ 0.03
GRIK1P39086 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms