Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 CHMP1AP1-201ENST00000445563 662 ntBASIC14.84□□□□□ -0.03
FDFT1P37268 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 AL136301.1-201ENST00000615830 422 ntBASIC14.84□□□□□ -0.03
FDFT1P37268 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 AHCYP2-201ENST00000430630 1300 ntBASIC14.84□□□□□ -0.03
FDFT1P37268 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.84□□□□□ -0.03
FDFT1P37268 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
FDFT1P37268 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
FDFT1P37268 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
FDFT1P37268 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.84□□□□□ -0.03
FDFT1P37268 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
FDFT1P37268 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.83□□□□□ -0.03
FDFT1P37268 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
FDFT1P37268 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
FDFT1P37268 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
FDFT1P37268 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
FDFT1P37268 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
FDFT1P37268 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.83□□□□□ -0.04
FDFT1P37268 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.83□□□□□ -0.04
FDFT1P37268 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.83□□□□□ -0.04
FDFT1P37268 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.83□□□□□ -0.04
FDFT1P37268 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.83□□□□□ -0.04
FDFT1P37268 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.83□□□□□ -0.04
FDFT1P37268 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.83□□□□□ -0.04
FDFT1P37268 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.83□□□□□ -0.04
FDFT1P37268 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
FDFT1P37268 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.83□□□□□ -0.04
FDFT1P37268 PPY2P-201ENST00000582808 702 ntBASIC14.83□□□□□ -0.04
FDFT1P37268 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.83□□□□□ -0.04
FDFT1P37268 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.83□□□□□ -0.04
FDFT1P37268 RHOXF1P1-202ENST00000635473 501 ntBASIC14.83□□□□□ -0.04
FDFT1P37268 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 AL022313.4-201ENST00000562756 2046 ntBASIC14.83□□□□□ -0.04
FDFT1P37268 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
FDFT1P37268 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
FDFT1P37268 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
FDFT1P37268 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
FDFT1P37268 TCAF1P1-201ENST00000414990 2232 ntBASIC14.82□□□□□ -0.04
FDFT1P37268 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 COL6A4P2-202ENST00000504443 2753 ntBASIC14.82□□□□□ -0.04
FDFT1P37268 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
FDFT1P37268 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.82□□□□□ -0.04
FDFT1P37268 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 MIR326-201ENST00000362220 95 ntBASIC14.82□□□□□ -0.04
FDFT1P37268 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
FDFT1P37268 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FDFT1P37268 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
FDFT1P37268 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms