Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.38□□□□□ -0.27
SHC1P29353 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.38□□□□□ -0.27
SHC1P29353 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.38□□□□□ -0.27
SHC1P29353 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 AL354702.1-201ENST00000442006 1960 ntBASIC13.38□□□□□ -0.27
SHC1P29353 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 AC105206.1-202ENST00000314927 2368 ntBASIC13.37□□□□□ -0.27
SHC1P29353 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SHC1P29353 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 AL136309.1-201ENST00000403917 691 ntBASIC13.37□□□□□ -0.27
SHC1P29353 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.37□□□□□ -0.27
SHC1P29353 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 RPL13AP20-201ENST00000459725 609 ntBASIC13.37□□□□□ -0.27
SHC1P29353 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.37□□□□□ -0.27
SHC1P29353 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.37□□□□□ -0.27
SHC1P29353 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.37□□□□□ -0.27
SHC1P29353 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.37□□□□□ -0.27
SHC1P29353 AC010328.2-201ENST00000597698 1111 ntBASIC13.37□□□□□ -0.27
SHC1P29353 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 AL033527.4-201ENST00000641026 673 ntBASIC13.37□□□□□ -0.27
SHC1P29353 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SHC1P29353 COL6A4P2-202ENST00000504443 2753 ntBASIC13.37□□□□□ -0.27
SHC1P29353 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SHC1P29353 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SHC1P29353 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SHC1P29353 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.36□□□□□ -0.27
SHC1P29353 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.36□□□□□ -0.27
SHC1P29353 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SHC1P29353 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.36□□□□□ -0.27
SHC1P29353 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SHC1P29353 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHC1P29353 AL355994.2-201ENST00000447882 704 ntBASIC13.36□□□□□ -0.27
SHC1P29353 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 AC022447.6-201ENST00000515522 438 ntBASIC13.36□□□□□ -0.27
SHC1P29353 RNA5SP412-201ENST00000516234 123 ntBASIC13.36□□□□□ -0.27
SHC1P29353 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.36□□□□□ -0.27
SHC1P29353 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.36□□□□□ -0.27
SHC1P29353 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms