Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AC007274.1-201ENST00000439805 662 ntBASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.67□□□□□ -0.06
HLA-DPA1P20036 RPSAP36-202ENST00000494591 1261 ntBASIC14.67□□□□□ -0.06
HLA-DPA1P20036 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DPA1P20036 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 KLF2P1-201ENST00000447438 1042 ntBASIC14.66□□□□□ -0.06
HLA-DPA1P20036 TUBB8P8-201ENST00000458717 1058 ntBASIC14.66□□□□□ -0.06
HLA-DPA1P20036 FAM86HP-204ENST00000513466 959 ntBASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 REXO1L6P-201ENST00000603433 1515 ntBASIC14.66□□□□□ -0.06
HLA-DPA1P20036 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 AC117489.1-201ENST00000625169 3217 ntBASIC14.66□□□□□ -0.06
HLA-DPA1P20036 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 TUBB8P4-201ENST00000511806 1324 ntBASIC14.66□□□□□ -0.06
HLA-DPA1P20036 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DPA1P20036 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 BTBD6P1-201ENST00000412176 1267 ntBASIC14.65□□□□□ -0.06
HLA-DPA1P20036 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DPA1P20036 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms