Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CAPN1P07384 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 AC015688.4-201ENST00000580780 1647 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 MST1P2-201ENST00000457982 2291 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 AC005252.3-201ENST00000623855 2258 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 RN7SL832P-201ENST00000607781 1756 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 MIR326-201ENST00000362220 95 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 RN7SKP230-201ENST00000365642 335 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CAPN1P07384 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 PFN1P12-201ENST00000455938 534 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.38□□□□□ -0.11
CAPN1P07384 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN1P07384 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.38□□□□□ -0.11
CAPN1P07384 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CAPN1P07384 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN1P07384 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CAPN1P07384 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CAPN1P07384 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPN1P07384 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPN1P07384 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPN1P07384 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.37□□□□□ -0.11
CAPN1P07384 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CAPN1P07384 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.37□□□□□ -0.11
CAPN1P07384 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CAPN1P07384 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 AC011474.4-201ENST00000623523 2076 ntBASIC14.37□□□□□ -0.11
CAPN1P07384 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CAPN1P07384 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CAPN1P07384 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.37□□□□□ -0.11
CAPN1P07384 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.37□□□□□ -0.11
CAPN1P07384 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN1P07384 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN1P07384 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN1P07384 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN1P07384 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.37□□□□□ -0.11
CAPN1P07384 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.37□□□□□ -0.11
CAPN1P07384 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 INE2-201ENST00000630399 1874 ntBASIC14.37□□□□□ -0.11
CAPN1P07384 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPN1P07384 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPN1P07384 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms