Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLIC1O00299 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.73□□□□□ -0.21
CLIC1O00299 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLIC1O00299 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLIC1O00299 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLIC1O00299 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CLIC1O00299 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.73□□□□□ -0.21
CLIC1O00299 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.73□□□□□ -0.21
CLIC1O00299 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLIC1O00299 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.72□□□□□ -0.21
CLIC1O00299 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.72□□□□□ -0.21
CLIC1O00299 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 PIN1P1-201ENST00000412108 996 ntBASIC13.72□□□□□ -0.21
CLIC1O00299 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.72□□□□□ -0.21
CLIC1O00299 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.72□□□□□ -0.21
CLIC1O00299 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.72□□□□□ -0.21
CLIC1O00299 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.72□□□□□ -0.21
CLIC1O00299 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.72□□□□□ -0.21
CLIC1O00299 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 AC104506.1-201ENST00000609247 429 ntBASIC13.72□□□□□ -0.21
CLIC1O00299 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLIC1O00299 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CLIC1O00299 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLIC1O00299 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.72□□□□□ -0.21
CLIC1O00299 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLIC1O00299 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLIC1O00299 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.71□□□□□ -0.21
CLIC1O00299 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLIC1O00299 USP17L6P-201ENST00000382470 1197 ntBASIC13.71□□□□□ -0.21
CLIC1O00299 AC004945.1-201ENST00000416738 983 ntBASIC13.71□□□□□ -0.21
CLIC1O00299 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.71□□□□□ -0.21
CLIC1O00299 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLIC1O00299 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLIC1O00299 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.71□□□□□ -0.21
CLIC1O00299 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.71□□□□□ -0.21
CLIC1O00299 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.71□□□□□ -0.21
CLIC1O00299 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CLIC1O00299 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CLIC1O00299 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.71□□□□□ -0.21
CLIC1O00299 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms