Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MXRA5Y-201ENST00000420610 8000 ntBASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 AL359845.1-201ENST00000458202 1648 ntBASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
TMEM256-PLSCR3K7ERE1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AL031133.1-201ENST00000406807 723 ntBASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 KRT18P43-201ENST00000469825 1281 ntBASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 FOSL1P1-201ENST00000511041 816 ntBASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC027307.2-201ENST00000591252 911 ntBASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AC026271.4-201ENST00000578214 1833 ntBASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
TMEM256-PLSCR3K7ERE1 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms