Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 IGHV3-19-201ENST00000521488 291 ntBASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PTCH2Q9Y6C5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.94■■□□□ 1.74
PTCH2Q9Y6C5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.94■■□□□ 1.74
PTCH2Q9Y6C5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.94■■□□□ 1.74
PTCH2Q9Y6C5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PTCH2Q9Y6C5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.94■■□□□ 1.74
PTCH2Q9Y6C5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.94■■□□□ 1.74
PTCH2Q9Y6C5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PTCH2Q9Y6C5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PTCH2Q9Y6C5 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.92■■□□□ 1.74
PTCH2Q9Y6C5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.91■■□□□ 1.74
PTCH2Q9Y6C5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.91■■□□□ 1.74
PTCH2Q9Y6C5 RAP2CP1-201ENST00000605103 478 ntBASIC25.91■■□□□ 1.74
PTCH2Q9Y6C5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 LINC02228-203ENST00000641970 1355 ntBASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PTCH2Q9Y6C5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
PTCH2Q9Y6C5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.73
PTCH2Q9Y6C5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
PTCH2Q9Y6C5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PTCH2Q9Y6C5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 CDCA4P2-201ENST00000441182 718 ntBASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.87■■□□□ 1.73
PTCH2Q9Y6C5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 ERN1-208ENST00000606895 2068 ntBASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
PTCH2Q9Y6C5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 AC104771.1-201ENST00000603335 964 ntBASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 AC073111.5-205ENST00000641717 521 ntBASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC25.85■■□□□ 1.73
PTCH2Q9Y6C5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
PTCH2Q9Y6C5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PTCH2Q9Y6C5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PTCH2Q9Y6C5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms