Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSM5Q9Y4Y9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 AL024507.2-201ENST00000606070 2574 ntBASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSM5Q9Y4Y9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSM5Q9Y4Y9 FOXO3B-201ENST00000395675 1928 ntBASIC18.64■□□□□ 0.58
LSM5Q9Y4Y9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LSM5Q9Y4Y9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM5Q9Y4Y9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM5Q9Y4Y9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.64■□□□□ 0.57
LSM5Q9Y4Y9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.64■□□□□ 0.57
LSM5Q9Y4Y9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSM5Q9Y4Y9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSM5Q9Y4Y9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LSM5Q9Y4Y9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.63■□□□□ 0.57
LSM5Q9Y4Y9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM5Q9Y4Y9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM5Q9Y4Y9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM5Q9Y4Y9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM5Q9Y4Y9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM5Q9Y4Y9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LSM5Q9Y4Y9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 MIR3960-201ENST00000583311 91 ntBASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LSM5Q9Y4Y9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.61■□□□□ 0.57
LSM5Q9Y4Y9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM5Q9Y4Y9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM5Q9Y4Y9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms