Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SIT1Q9Y3P8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SIT1Q9Y3P8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIT1Q9Y3P8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.07■■□□□ 1.28
SIT1Q9Y3P8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SIT1Q9Y3P8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 KRT18P14-201ENST00000534205 1250 ntBASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.06■■□□□ 1.28
SIT1Q9Y3P8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SIT1Q9Y3P8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SIT1Q9Y3P8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SIT1Q9Y3P8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SIT1Q9Y3P8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.04■■□□□ 1.28
SIT1Q9Y3P8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SIT1Q9Y3P8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.04■■□□□ 1.28
SIT1Q9Y3P8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.04■■□□□ 1.28
SIT1Q9Y3P8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 LINC02228-203ENST00000641970 1355 ntBASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.03■■□□□ 1.28
SIT1Q9Y3P8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SIT1Q9Y3P8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 TERF1P2-201ENST00000583350 1212 ntBASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.01■■□□□ 1.27
SIT1Q9Y3P8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
SIT1Q9Y3P8 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SIT1Q9Y3P8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23■■□□□ 1.27
SIT1Q9Y3P8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
SIT1Q9Y3P8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SIT1Q9Y3P8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23■■□□□ 1.27
SIT1Q9Y3P8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23■■□□□ 1.27
SIT1Q9Y3P8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23■■□□□ 1.27
SIT1Q9Y3P8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SIT1Q9Y3P8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SIT1Q9Y3P8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.97■■□□□ 1.27
SIT1Q9Y3P8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms