Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNIH4Q9P003 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNIH4Q9P003 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.16■□□□□ 0.98
CNIH4Q9P003 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNIH4Q9P003 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNIH4Q9P003 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CNIH4Q9P003 AC004448.1-201ENST00000458332 883 ntBASIC21.16■□□□□ 0.98
CNIH4Q9P003 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CNIH4Q9P003 MIR6724-1-201ENST00000616420 92 ntBASIC21.16■□□□□ 0.98
CNIH4Q9P003 MIR6724-2-201ENST00000616483 92 ntBASIC21.16■□□□□ 0.98
CNIH4Q9P003 MIR6724-4-201ENST00000617390 92 ntBASIC21.16■□□□□ 0.98
CNIH4Q9P003 MIR6724-3-201ENST00000622482 92 ntBASIC21.16■□□□□ 0.98
CNIH4Q9P003 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.16■□□□□ 0.98
CNIH4Q9P003 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.16■□□□□ 0.98
CNIH4Q9P003 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.16■□□□□ 0.98
CNIH4Q9P003 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CNIH4Q9P003 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CNIH4Q9P003 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNIH4Q9P003 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNIH4Q9P003 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNIH4Q9P003 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNIH4Q9P003 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CNIH4Q9P003 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNIH4Q9P003 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.15■□□□□ 0.98
CNIH4Q9P003 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.15■□□□□ 0.98
CNIH4Q9P003 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNIH4Q9P003 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CNIH4Q9P003 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.14■□□□□ 0.97
CNIH4Q9P003 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNIH4Q9P003 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
CNIH4Q9P003 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNIH4Q9P003 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.14■□□□□ 0.97
CNIH4Q9P003 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNIH4Q9P003 DUSP8P5-201ENST00000422884 1815 ntBASIC21.13■□□□□ 0.97
CNIH4Q9P003 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.13■□□□□ 0.97
CNIH4Q9P003 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.13■□□□□ 0.97
CNIH4Q9P003 AC068473.5-201ENST00000616428 2072 ntBASIC21.13■□□□□ 0.97
CNIH4Q9P003 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNIH4Q9P003 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNIH4Q9P003 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.13■□□□□ 0.97
CNIH4Q9P003 AL022069.1-201ENST00000568025 1636 ntBASIC21.13■□□□□ 0.97
CNIH4Q9P003 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CNIH4Q9P003 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CNIH4Q9P003 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNIH4Q9P003 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.13■□□□□ 0.97
CNIH4Q9P003 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNIH4Q9P003 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNIH4Q9P003 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CNIH4Q9P003 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.12■□□□□ 0.97
CNIH4Q9P003 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CNIH4Q9P003 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNIH4Q9P003 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CNIH4Q9P003 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.12■□□□□ 0.97
CNIH4Q9P003 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNIH4Q9P003 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNIH4Q9P003 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNIH4Q9P003 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.11■□□□□ 0.97
CNIH4Q9P003 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNIH4Q9P003 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.11■□□□□ 0.97
CNIH4Q9P003 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNIH4Q9P003 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNIH4Q9P003 AL161729.1-201ENST00000604104 1402 ntBASIC21.11■□□□□ 0.97
CNIH4Q9P003 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNIH4Q9P003 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.1■□□□□ 0.97
CNIH4Q9P003 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CNIH4Q9P003 AC131274.2-201ENST00000580697 1507 ntBASIC21.1■□□□□ 0.97
CNIH4Q9P003 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNIH4Q9P003 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.1■□□□□ 0.97
CNIH4Q9P003 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNIH4Q9P003 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.1■□□□□ 0.97
CNIH4Q9P003 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CNIH4Q9P003 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNIH4Q9P003 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.09■□□□□ 0.97
CNIH4Q9P003 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.09■□□□□ 0.97
CNIH4Q9P003 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNIH4Q9P003 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.09■□□□□ 0.97
CNIH4Q9P003 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.09■□□□□ 0.97
CNIH4Q9P003 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.08■□□□□ 0.97
CNIH4Q9P003 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNIH4Q9P003 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNIH4Q9P003 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CNIH4Q9P003 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
CNIH4Q9P003 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.08■□□□□ 0.97
CNIH4Q9P003 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.08■□□□□ 0.97
CNIH4Q9P003 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.08■□□□□ 0.97
CNIH4Q9P003 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNIH4Q9P003 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CNIH4Q9P003 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNIH4Q9P003 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.07■□□□□ 0.96
CNIH4Q9P003 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNIH4Q9P003 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNIH4Q9P003 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.07■□□□□ 0.96
CNIH4Q9P003 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNIH4Q9P003 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.07■□□□□ 0.96
CNIH4Q9P003 AC012676.1-201ENST00000574705 1949 ntBASIC21.07■□□□□ 0.96
CNIH4Q9P003 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CNIH4Q9P003 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.06■□□□□ 0.96
CNIH4Q9P003 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.06■□□□□ 0.96
CNIH4Q9P003 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.06■□□□□ 0.96
CNIH4Q9P003 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms