Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 AC009299.2-201ENST00000482477 511 ntBASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH18Q9HCL0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
PCDH18Q9HCL0 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDH18Q9HCL0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH18Q9HCL0 Z92544.1-202ENST00000571933 1220 ntBASIC23.51■■□□□ 1.35
PCDH18Q9HCL0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH18Q9HCL0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH18Q9HCL0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
PCDH18Q9HCL0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH18Q9HCL0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH18Q9HCL0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH18Q9HCL0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH18Q9HCL0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH18Q9HCL0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 KRT125P-201ENST00000546827 989 ntBASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 AC092028.1-203ENST00000608262 953 ntBASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH18Q9HCL0 AC092068.2-201ENST00000590491 1708 ntBASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 AC239859.2-201ENST00000444165 318 ntBASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PCDH18Q9HCL0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 MIR4787-201ENST00000607364 84 ntBASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 MIR6722-201ENST00000617286 78 ntBASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDH18Q9HCL0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDH18Q9HCL0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDH18Q9HCL0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms