Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 AC137630.3-201ENST00000607245 391 ntBASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
POPDC3Q9HBV1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POPDC3Q9HBV1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 KRT8P33-201ENST00000508125 1423 ntBASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 SNX5-217ENST00000606557 1087 ntBASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.33■■□□□ 1.17
POPDC3Q9HBV1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
POPDC3Q9HBV1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
POPDC3Q9HBV1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
POPDC3Q9HBV1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
POPDC3Q9HBV1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
POPDC3Q9HBV1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
POPDC3Q9HBV1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 AL031848.2-201ENST00000607670 837 ntBASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 C9orf163-202ENST00000624034 2573 ntBASIC22.3■■□□□ 1.16
POPDC3Q9HBV1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POPDC3Q9HBV1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
POPDC3Q9HBV1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.27■■□□□ 1.16
POPDC3Q9HBV1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
POPDC3Q9HBV1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
POPDC3Q9HBV1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
POPDC3Q9HBV1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms