Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 Z92544.1-202ENST00000571933 1220 ntBASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SEC61A2Q9H9S3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 MIR4787-201ENST00000607364 84 ntBASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 AC021242.3-201ENST00000607598 1377 ntBASIC20.21■□□□□ 0.83
SEC61A2Q9H9S3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 KRT125P-201ENST00000546827 989 ntBASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A2Q9H9S3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A2Q9H9S3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A2Q9H9S3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEC61A2Q9H9S3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SEC61A2Q9H9S3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms