Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
LSG1Q9H089 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
LSG1Q9H089 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
LSG1Q9H089 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.23■■□□□ 1.95
LSG1Q9H089 LSM7-203ENST00000585409 512 ntTSL 2 BASIC27.23■■□□□ 1.95
LSG1Q9H089 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LSG1Q9H089 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.23■■□□□ 1.95
LSG1Q9H089 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
LSG1Q9H089 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
LSG1Q9H089 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
LSG1Q9H089 AC068473.5-201ENST00000616428 2072 ntBASIC27.22■■□□□ 1.95
LSG1Q9H089 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LSG1Q9H089 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
LSG1Q9H089 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LSG1Q9H089 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
LSG1Q9H089 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
LSG1Q9H089 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.22■■□□□ 1.95
LSG1Q9H089 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
LSG1Q9H089 C9orf163-202ENST00000624034 2573 ntBASIC27.21■■□□□ 1.95
LSG1Q9H089 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.21■■□□□ 1.95
LSG1Q9H089 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LSG1Q9H089 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.2■■□□□ 1.95
LSG1Q9H089 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.2■■□□□ 1.94
LSG1Q9H089 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.2■■□□□ 1.94
LSG1Q9H089 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
LSG1Q9H089 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
LSG1Q9H089 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.19■■□□□ 1.94
LSG1Q9H089 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSG1Q9H089 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSG1Q9H089 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LSG1Q9H089 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.19■■□□□ 1.94
LSG1Q9H089 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.19■■□□□ 1.94
LSG1Q9H089 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSG1Q9H089 AL451085.2-201ENST00000605085 799 ntBASIC27.19■■□□□ 1.94
LSG1Q9H089 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LSG1Q9H089 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
LSG1Q9H089 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.18■■□□□ 1.94
LSG1Q9H089 AC133561.1-201ENST00000568600 2415 ntBASIC27.18■■□□□ 1.94
LSG1Q9H089 DUSP8P3-201ENST00000399571 1760 ntBASIC27.18■■□□□ 1.94
LSG1Q9H089 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 BX664725.1-201ENST00000438252 379 ntBASIC27.18■■□□□ 1.94
LSG1Q9H089 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.18■■□□□ 1.94
LSG1Q9H089 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.18■■□□□ 1.94
LSG1Q9H089 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
LSG1Q9H089 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LSG1Q9H089 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.18■■□□□ 1.94
LSG1Q9H089 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LSG1Q9H089 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.17■■□□□ 1.94
LSG1Q9H089 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.17■■□□□ 1.94
LSG1Q9H089 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
LSG1Q9H089 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
LSG1Q9H089 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
LSG1Q9H089 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
LSG1Q9H089 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.17■■□□□ 1.94
LSG1Q9H089 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.17■■□□□ 1.94
LSG1Q9H089 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LSG1Q9H089 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
LSG1Q9H089 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
LSG1Q9H089 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LSG1Q9H089 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
LSG1Q9H089 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
LSG1Q9H089 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.15■■□□□ 1.94
LSG1Q9H089 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LSG1Q9H089 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.15■■□□□ 1.94
LSG1Q9H089 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LSG1Q9H089 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.15■■□□□ 1.94
LSG1Q9H089 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.15■■□□□ 1.94
LSG1Q9H089 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LSG1Q9H089 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LSG1Q9H089 AC009299.2-201ENST00000482477 511 ntBASIC27.15■■□□□ 1.94
LSG1Q9H089 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LSG1Q9H089 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
LSG1Q9H089 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.15■■□□□ 1.94
LSG1Q9H089 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
LSG1Q9H089 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
LSG1Q9H089 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LSG1Q9H089 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.14■■□□□ 1.94
LSG1Q9H089 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
LSG1Q9H089 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.14■■□□□ 1.94
LSG1Q9H089 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.14■■□□□ 1.94
LSG1Q9H089 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LSG1Q9H089 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
LSG1Q9H089 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
LSG1Q9H089 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LSG1Q9H089 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.13■■□□□ 1.93
LSG1Q9H089 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
LSG1Q9H089 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.13■■□□□ 1.93
LSG1Q9H089 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
LSG1Q9H089 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.13■■□□□ 1.93
LSG1Q9H089 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
LSG1Q9H089 Z92544.1-202ENST00000571933 1220 ntBASIC27.13■■□□□ 1.93
LSG1Q9H089 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.13■■□□□ 1.93
LSG1Q9H089 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.13■■□□□ 1.93
LSG1Q9H089 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms