Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 SUZ12P1-203ENST00000578195 985 ntBASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 AL359258.2-201ENST00000564063 1566 ntBASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 GUSBP5-202ENST00000510805 1989 ntBASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 MIR3665-201ENST00000578708 105 ntBASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 HLA-L-211ENST00000482052 1765 ntBASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 AL024507.2-201ENST00000606070 2574 ntBASIC6.1□□□□□ -1.43
LCE3DQ9BYE3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 C1orf229-201ENST00000623686 2258 ntBASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 AC008813.1-201ENST00000536597 885 ntBASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LCE3DQ9BYE3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
LCE3DQ9BYE3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
LCE3DQ9BYE3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC6.09□□□□□ -1.44
LCE3DQ9BYE3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
LCE3DQ9BYE3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
LCE3DQ9BYE3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
LCE3DQ9BYE3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
LCE3DQ9BYE3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LCE3DQ9BYE3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms