Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 LINC01124-201ENST00000409786 2117 ntBASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 AC004448.1-201ENST00000458332 883 ntBASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 MIR6722-201ENST00000617286 78 ntBASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.9■□□□□ 0.62
PCGF1Q9BSM1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.89■□□□□ 0.62
PCGF1Q9BSM1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.89■□□□□ 0.62
PCGF1Q9BSM1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 MIR3621-201ENST00000580529 85 ntBASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCGF1Q9BSM1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 AC131281.2-201ENST00000520478 145 ntBASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCGF1Q9BSM1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCGF1Q9BSM1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 AL022069.1-201ENST00000568025 1636 ntBASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 AC131274.2-201ENST00000580697 1507 ntBASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 AC079834.2-201ENST00000609776 1949 ntBASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PCGF1Q9BSM1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 AL136116.3-201ENST00000402907 1138 ntBASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PCGF1Q9BSM1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 CLDN5-201ENST00000403084 2357 ntBASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 HLA-L-211ENST00000482052 1765 ntBASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCGF1Q9BSM1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.83■□□□□ 0.61
PCGF1Q9BSM1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCGF1Q9BSM1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCGF1Q9BSM1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCGF1Q9BSM1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.83■□□□□ 0.6
PCGF1Q9BSM1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms