Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDCA3Q99618 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDCA3Q99618 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CDCA3Q99618 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDCA3Q99618 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CDCA3Q99618 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDCA3Q99618 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
CDCA3Q99618 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.96■■□□□ 1.43
CDCA3Q99618 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CDCA3Q99618 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CDCA3Q99618 AC141586.4-201ENST00000624558 1573 ntBASIC23.95■■□□□ 1.43
CDCA3Q99618 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDCA3Q99618 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDCA3Q99618 IGHV3-19-201ENST00000521488 291 ntBASIC23.95■■□□□ 1.42
CDCA3Q99618 AL354811.1-201ENST00000610286 706 ntBASIC23.95■■□□□ 1.42
CDCA3Q99618 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDCA3Q99618 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CDCA3Q99618 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.95■■□□□ 1.42
CDCA3Q99618 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDCA3Q99618 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.94■■□□□ 1.42
CDCA3Q99618 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDCA3Q99618 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.94■■□□□ 1.42
CDCA3Q99618 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.94■■□□□ 1.42
CDCA3Q99618 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CDCA3Q99618 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDCA3Q99618 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDCA3Q99618 MIR572-201ENST00000384983 95 ntBASIC23.94■■□□□ 1.42
CDCA3Q99618 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.94■■□□□ 1.42
CDCA3Q99618 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.94■■□□□ 1.42
CDCA3Q99618 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.94■■□□□ 1.42
CDCA3Q99618 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.94■■□□□ 1.42
CDCA3Q99618 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.94■■□□□ 1.42
CDCA3Q99618 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CDCA3Q99618 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CDCA3Q99618 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDCA3Q99618 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
CDCA3Q99618 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CDCA3Q99618 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CDCA3Q99618 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.93■■□□□ 1.42
CDCA3Q99618 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.93■■□□□ 1.42
CDCA3Q99618 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.93■■□□□ 1.42
CDCA3Q99618 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.93■■□□□ 1.42
CDCA3Q99618 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
CDCA3Q99618 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CDCA3Q99618 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDCA3Q99618 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.93■■□□□ 1.42
CDCA3Q99618 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.93■■□□□ 1.42
CDCA3Q99618 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CDCA3Q99618 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDCA3Q99618 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDCA3Q99618 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.92■■□□□ 1.42
CDCA3Q99618 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.92■■□□□ 1.42
CDCA3Q99618 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.92■■□□□ 1.42
CDCA3Q99618 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.92■■□□□ 1.42
CDCA3Q99618 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.92■■□□□ 1.42
CDCA3Q99618 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDCA3Q99618 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CDCA3Q99618 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.92■■□□□ 1.42
CDCA3Q99618 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CDCA3Q99618 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CDCA3Q99618 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CDCA3Q99618 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDCA3Q99618 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CDCA3Q99618 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.91■■□□□ 1.42
CDCA3Q99618 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CDCA3Q99618 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.91■■□□□ 1.42
CDCA3Q99618 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.91■■□□□ 1.42
CDCA3Q99618 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.91■■□□□ 1.42
CDCA3Q99618 AC012414.1-201ENST00000556676 535 ntBASIC23.91■■□□□ 1.42
CDCA3Q99618 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
CDCA3Q99618 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.91■■□□□ 1.42
CDCA3Q99618 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDCA3Q99618 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.9■■□□□ 1.42
CDCA3Q99618 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CDCA3Q99618 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.9■■□□□ 1.42
CDCA3Q99618 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.9■■□□□ 1.42
CDCA3Q99618 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDCA3Q99618 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDCA3Q99618 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CDCA3Q99618 AC004911.1-201ENST00000416316 871 ntBASIC23.89■■□□□ 1.41
CDCA3Q99618 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.89■■□□□ 1.41
CDCA3Q99618 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.89■■□□□ 1.41
CDCA3Q99618 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDCA3Q99618 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.89■■□□□ 1.41
CDCA3Q99618 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.89■■□□□ 1.41
CDCA3Q99618 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.88■■□□□ 1.41
CDCA3Q99618 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.88■■□□□ 1.41
CDCA3Q99618 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.88■■□□□ 1.41
CDCA3Q99618 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CDCA3Q99618 ID1-201ENST00000376105 1233 ntBASIC23.88■■□□□ 1.41
CDCA3Q99618 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.88■■□□□ 1.41
CDCA3Q99618 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms