Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.4■□□□□ 0.7
SPG11Q96JI7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.4■□□□□ 0.7
SPG11Q96JI7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPG11Q96JI7 KRT18P14-201ENST00000534205 1250 ntBASIC19.39■□□□□ 0.69
SPG11Q96JI7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPG11Q96JI7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SPG11Q96JI7 AC126544.1-201ENST00000580842 1059 ntBASIC19.39■□□□□ 0.69
SPG11Q96JI7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SPG11Q96JI7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SPG11Q96JI7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SPG11Q96JI7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.38■□□□□ 0.69
SPG11Q96JI7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.38■□□□□ 0.69
SPG11Q96JI7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPG11Q96JI7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.38■□□□□ 0.69
SPG11Q96JI7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SPG11Q96JI7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SPG11Q96JI7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SPG11Q96JI7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPG11Q96JI7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPG11Q96JI7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPG11Q96JI7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.37■□□□□ 0.69
SPG11Q96JI7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.37■□□□□ 0.69
SPG11Q96JI7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.37■□□□□ 0.69
SPG11Q96JI7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SPG11Q96JI7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.37■□□□□ 0.69
SPG11Q96JI7 AC012414.1-201ENST00000556676 535 ntBASIC19.37■□□□□ 0.69
SPG11Q96JI7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPG11Q96JI7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SPG11Q96JI7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.37■□□□□ 0.69
SPG11Q96JI7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPG11Q96JI7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.36■□□□□ 0.69
SPG11Q96JI7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.36■□□□□ 0.69
SPG11Q96JI7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.36■□□□□ 0.69
SPG11Q96JI7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.36■□□□□ 0.69
SPG11Q96JI7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPG11Q96JI7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPG11Q96JI7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPG11Q96JI7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.36■□□□□ 0.69
SPG11Q96JI7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SPG11Q96JI7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPG11Q96JI7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPG11Q96JI7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPG11Q96JI7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPG11Q96JI7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.36■□□□□ 0.69
SPG11Q96JI7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPG11Q96JI7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPG11Q96JI7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SPG11Q96JI7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPG11Q96JI7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 AC010501.1-201ENST00000606270 1962 ntBASIC19.34■□□□□ 0.69
SPG11Q96JI7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 AL022069.1-201ENST00000568025 1636 ntBASIC19.34■□□□□ 0.69
SPG11Q96JI7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPG11Q96JI7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SPG11Q96JI7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPG11Q96JI7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.33■□□□□ 0.69
SPG11Q96JI7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SPG11Q96JI7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.33■□□□□ 0.69
SPG11Q96JI7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPG11Q96JI7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.33■□□□□ 0.69
SPG11Q96JI7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.33■□□□□ 0.69
SPG11Q96JI7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPG11Q96JI7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SPG11Q96JI7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPG11Q96JI7 CDCA4P2-201ENST00000441182 718 ntBASIC19.33■□□□□ 0.68
SPG11Q96JI7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.33■□□□□ 0.68
SPG11Q96JI7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
SPG11Q96JI7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SPG11Q96JI7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.32■□□□□ 0.68
SPG11Q96JI7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPG11Q96JI7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPG11Q96JI7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPG11Q96JI7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.32■□□□□ 0.68
SPG11Q96JI7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.32■□□□□ 0.68
SPG11Q96JI7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPG11Q96JI7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPG11Q96JI7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SPG11Q96JI7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.32■□□□□ 0.68
SPG11Q96JI7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPG11Q96JI7 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms