Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLDN23Q96B33 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN23Q96B33 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.01■■□□□ 1.27
CLDN23Q96B33 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN23Q96B33 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.01■■□□□ 1.27
CLDN23Q96B33 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.01■■□□□ 1.27
CLDN23Q96B33 IGHV3-19-201ENST00000521488 291 ntBASIC23.01■■□□□ 1.27
CLDN23Q96B33 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CLDN23Q96B33 AL354811.1-201ENST00000610286 706 ntBASIC23.01■■□□□ 1.27
CLDN23Q96B33 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.01■■□□□ 1.27
CLDN23Q96B33 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.01■■□□□ 1.27
CLDN23Q96B33 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLDN23Q96B33 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23■■□□□ 1.27
CLDN23Q96B33 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23■■□□□ 1.27
CLDN23Q96B33 AC012414.1-201ENST00000556676 535 ntBASIC23■■□□□ 1.27
CLDN23Q96B33 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23■■□□□ 1.27
CLDN23Q96B33 CCDC92B-201ENST00000575506 885 ntBASIC23■■□□□ 1.27
CLDN23Q96B33 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
CLDN23Q96B33 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLDN23Q96B33 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
CLDN23Q96B33 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLDN23Q96B33 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN23Q96B33 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN23Q96B33 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN23Q96B33 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.99■■□□□ 1.27
CLDN23Q96B33 NTF6G-201ENST00000591094 616 ntBASIC22.99■■□□□ 1.27
CLDN23Q96B33 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN23Q96B33 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN23Q96B33 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
CLDN23Q96B33 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLDN23Q96B33 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.99■■□□□ 1.27
CLDN23Q96B33 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.99■■□□□ 1.27
CLDN23Q96B33 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN23Q96B33 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN23Q96B33 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN23Q96B33 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.98■■□□□ 1.27
CLDN23Q96B33 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.98■■□□□ 1.27
CLDN23Q96B33 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CLDN23Q96B33 MIR6084-201ENST00000622012 110 ntBASIC22.98■■□□□ 1.27
CLDN23Q96B33 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.98■■□□□ 1.27
CLDN23Q96B33 SLC6A10P-202ENST00000431994 2058 ntBASIC22.97■■□□□ 1.27
CLDN23Q96B33 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.97■■□□□ 1.27
CLDN23Q96B33 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.97■■□□□ 1.27
CLDN23Q96B33 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.97■■□□□ 1.27
CLDN23Q96B33 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN23Q96B33 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN23Q96B33 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.97■■□□□ 1.27
CLDN23Q96B33 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.97■■□□□ 1.27
CLDN23Q96B33 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN23Q96B33 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN23Q96B33 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.97■■□□□ 1.27
CLDN23Q96B33 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN23Q96B33 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN23Q96B33 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLDN23Q96B33 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN23Q96B33 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN23Q96B33 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.96■■□□□ 1.27
CLDN23Q96B33 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.96■■□□□ 1.27
CLDN23Q96B33 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN23Q96B33 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLDN23Q96B33 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CLDN23Q96B33 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.95■■□□□ 1.26
CLDN23Q96B33 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.95■■□□□ 1.26
CLDN23Q96B33 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN23Q96B33 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN23Q96B33 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN23Q96B33 TERF1P2-201ENST00000583350 1212 ntBASIC22.95■■□□□ 1.26
CLDN23Q96B33 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN23Q96B33 AC141586.4-201ENST00000624558 1573 ntBASIC22.95■■□□□ 1.26
CLDN23Q96B33 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLDN23Q96B33 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CLDN23Q96B33 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLDN23Q96B33 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLDN23Q96B33 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CLDN23Q96B33 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLDN23Q96B33 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CLDN23Q96B33 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.94■■□□□ 1.26
CLDN23Q96B33 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CLDN23Q96B33 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.94■■□□□ 1.26
CLDN23Q96B33 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.94■■□□□ 1.26
CLDN23Q96B33 KRT18P14-201ENST00000534205 1250 ntBASIC22.94■■□□□ 1.26
CLDN23Q96B33 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.94■■□□□ 1.26
CLDN23Q96B33 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CLDN23Q96B33 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLDN23Q96B33 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.93■■□□□ 1.26
CLDN23Q96B33 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.93■■□□□ 1.26
CLDN23Q96B33 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLDN23Q96B33 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CLDN23Q96B33 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CLDN23Q96B33 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CLDN23Q96B33 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CLDN23Q96B33 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLDN23Q96B33 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CLDN23Q96B33 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.92■■□□□ 1.26
CLDN23Q96B33 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.92■■□□□ 1.26
CLDN23Q96B33 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CLDN23Q96B33 AL161729.1-201ENST00000604104 1402 ntBASIC22.91■■□□□ 1.26
CLDN23Q96B33 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.91■■□□□ 1.26
CLDN23Q96B33 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CLDN23Q96B33 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms