Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.3■■□□□ 1.48
SHC3Q92529 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.3■■□□□ 1.48
SHC3Q92529 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 Z92544.1-202ENST00000571933 1220 ntBASIC24.3■■□□□ 1.48
SHC3Q92529 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.3■■□□□ 1.48
SHC3Q92529 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SHC3Q92529 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHC3Q92529 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.29■■□□□ 1.48
SHC3Q92529 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SHC3Q92529 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.29■■□□□ 1.48
SHC3Q92529 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.29■■□□□ 1.48
SHC3Q92529 AL451085.2-201ENST00000605085 799 ntBASIC24.29■■□□□ 1.48
SHC3Q92529 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.29■■□□□ 1.48
SHC3Q92529 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.29■■□□□ 1.48
SHC3Q92529 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHC3Q92529 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHC3Q92529 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHC3Q92529 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHC3Q92529 AC009299.2-201ENST00000482477 511 ntBASIC24.28■■□□□ 1.48
SHC3Q92529 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SHC3Q92529 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
SHC3Q92529 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SHC3Q92529 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.28■■□□□ 1.48
SHC3Q92529 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.28■■□□□ 1.48
SHC3Q92529 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SHC3Q92529 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.27■■□□□ 1.48
SHC3Q92529 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SHC3Q92529 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.27■■□□□ 1.48
SHC3Q92529 MIR6722-201ENST00000617286 78 ntBASIC24.27■■□□□ 1.48
SHC3Q92529 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.27■■□□□ 1.48
SHC3Q92529 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SHC3Q92529 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHC3Q92529 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
SHC3Q92529 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SHC3Q92529 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.27■■□□□ 1.48
SHC3Q92529 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SHC3Q92529 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.26■■□□□ 1.47
SHC3Q92529 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SHC3Q92529 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.26■■□□□ 1.47
SHC3Q92529 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.26■■□□□ 1.47
SHC3Q92529 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHC3Q92529 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHC3Q92529 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHC3Q92529 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SHC3Q92529 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.26■■□□□ 1.47
SHC3Q92529 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SHC3Q92529 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.25■■□□□ 1.47
SHC3Q92529 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SHC3Q92529 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.25■■□□□ 1.47
SHC3Q92529 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.25■■□□□ 1.47
SHC3Q92529 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SHC3Q92529 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.25■■□□□ 1.47
SHC3Q92529 AC092028.1-203ENST00000608262 953 ntBASIC24.25■■□□□ 1.47
SHC3Q92529 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SHC3Q92529 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.25■■□□□ 1.47
SHC3Q92529 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SHC3Q92529 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.25■■□□□ 1.47
SHC3Q92529 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.24■■□□□ 1.47
SHC3Q92529 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.24■■□□□ 1.47
SHC3Q92529 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.24■■□□□ 1.47
SHC3Q92529 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.24■■□□□ 1.47
SHC3Q92529 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.24■■□□□ 1.47
SHC3Q92529 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.24■■□□□ 1.47
SHC3Q92529 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.24■■□□□ 1.47
SHC3Q92529 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SHC3Q92529 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 DUSP8P3-201ENST00000399571 1760 ntBASIC24.24■■□□□ 1.47
SHC3Q92529 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SHC3Q92529 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.23■■□□□ 1.47
SHC3Q92529 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHC3Q92529 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.23■■□□□ 1.47
SHC3Q92529 KRT125P-201ENST00000546827 989 ntBASIC24.23■■□□□ 1.47
SHC3Q92529 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SHC3Q92529 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.23■■□□□ 1.47
SHC3Q92529 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SHC3Q92529 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SHC3Q92529 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHC3Q92529 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHC3Q92529 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
SHC3Q92529 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.22■■□□□ 1.47
SHC3Q92529 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.22■■□□□ 1.47
SHC3Q92529 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHC3Q92529 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHC3Q92529 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHC3Q92529 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SHC3Q92529 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SHC3Q92529 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms