Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.81■■□□□ 1.4
RNF139Q8WU17 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF139Q8WU17 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF139Q8WU17 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RNF139Q8WU17 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.8■■□□□ 1.4
RNF139Q8WU17 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RNF139Q8WU17 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF139Q8WU17 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
RNF139Q8WU17 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RNF139Q8WU17 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF139Q8WU17 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF139Q8WU17 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF139Q8WU17 ABCB10P4-201ENST00000566803 2184 ntBASIC23.78■■□□□ 1.4
RNF139Q8WU17 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF139Q8WU17 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RNF139Q8WU17 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.78■■□□□ 1.4
RNF139Q8WU17 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RNF139Q8WU17 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF139Q8WU17 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RNF139Q8WU17 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.77■■□□□ 1.4
RNF139Q8WU17 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF139Q8WU17 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF139Q8WU17 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF139Q8WU17 AC131281.2-201ENST00000520478 145 ntBASIC23.77■■□□□ 1.4
RNF139Q8WU17 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF139Q8WU17 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF139Q8WU17 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF139Q8WU17 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF139Q8WU17 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF139Q8WU17 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF139Q8WU17 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF139Q8WU17 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF139Q8WU17 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF139Q8WU17 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF139Q8WU17 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF139Q8WU17 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF139Q8WU17 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
RNF139Q8WU17 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RNF139Q8WU17 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF139Q8WU17 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF139Q8WU17 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF139Q8WU17 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF139Q8WU17 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
RNF139Q8WU17 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF139Q8WU17 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF139Q8WU17 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF139Q8WU17 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF139Q8WU17 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RNF139Q8WU17 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF139Q8WU17 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF139Q8WU17 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF139Q8WU17 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF139Q8WU17 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF139Q8WU17 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.72■■□□□ 1.39
RNF139Q8WU17 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF139Q8WU17 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF139Q8WU17 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF139Q8WU17 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
RNF139Q8WU17 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF139Q8WU17 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF139Q8WU17 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RNF139Q8WU17 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF139Q8WU17 AL136116.3-201ENST00000402907 1138 ntBASIC23.71■■□□□ 1.39
RNF139Q8WU17 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.71■■□□□ 1.39
RNF139Q8WU17 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF139Q8WU17 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RNF139Q8WU17 AL512631.2-201ENST00000604634 923 ntBASIC23.71■■□□□ 1.39
RNF139Q8WU17 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.71■■□□□ 1.39
RNF139Q8WU17 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF139Q8WU17 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF139Q8WU17 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF139Q8WU17 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF139Q8WU17 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RNF139Q8WU17 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RNF139Q8WU17 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF139Q8WU17 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF139Q8WU17 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms