Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
NKX2-3Q8TAU0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.01■■□□□ 1.91
NKX2-3Q8TAU0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.01■■□□□ 1.91
NKX2-3Q8TAU0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
NKX2-3Q8TAU0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
NKX2-3Q8TAU0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
NKX2-3Q8TAU0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.01■■□□□ 1.91
NKX2-3Q8TAU0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.01■■□□□ 1.91
NKX2-3Q8TAU0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NKX2-3Q8TAU0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 SUDS3P1-201ENST00000505831 966 ntBASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
NKX2-3Q8TAU0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NKX2-3Q8TAU0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
NKX2-3Q8TAU0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NKX2-3Q8TAU0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.97■■□□□ 1.91
NKX2-3Q8TAU0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NKX2-3Q8TAU0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.97■■□□□ 1.91
NKX2-3Q8TAU0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.97■■□□□ 1.91
NKX2-3Q8TAU0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
NKX2-3Q8TAU0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
NKX2-3Q8TAU0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.95■■□□□ 1.91
NKX2-3Q8TAU0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.95■■□□□ 1.9
NKX2-3Q8TAU0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
NKX2-3Q8TAU0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
NKX2-3Q8TAU0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NKX2-3Q8TAU0 AC141586.4-201ENST00000624558 1573 ntBASIC26.94■■□□□ 1.9
NKX2-3Q8TAU0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NKX2-3Q8TAU0 AL031432.3-201ENST00000607698 485 ntBASIC26.94■■□□□ 1.9
NKX2-3Q8TAU0 ALDH1A3-203ENST00000557963 1670 ntBASIC26.94■■□□□ 1.9
NKX2-3Q8TAU0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NKX2-3Q8TAU0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 UNC93B3-201ENST00000308076 687 ntBASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.92■■□□□ 1.9
NKX2-3Q8TAU0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 EDA-201ENST00000338901 1233 ntBASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
NKX2-3Q8TAU0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NKX2-3Q8TAU0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms