Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDND2Q8NHS1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDND2Q8NHS1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDND2Q8NHS1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.21■□□□□ 0.67
CLDND2Q8NHS1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDND2Q8NHS1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 AC131274.2-201ENST00000580697 1507 ntBASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDND2Q8NHS1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 AC005703.6-201ENST00000623265 1329 ntBASIC19.19■□□□□ 0.66
CLDND2Q8NHS1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDND2Q8NHS1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 MIR935-201ENST00000401179 91 ntBASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLDND2Q8NHS1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 AC005837.3-201ENST00000612163 286 ntBASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDND2Q8NHS1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDND2Q8NHS1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDND2Q8NHS1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLDND2Q8NHS1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLDND2Q8NHS1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDND2Q8NHS1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLDND2Q8NHS1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDND2Q8NHS1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDND2Q8NHS1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 CLDN5-201ENST00000403084 2357 ntBASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDND2Q8NHS1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms