Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAB42Q8N4Z0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB42Q8N4Z0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.05■■□□□ 1.12
RAB42Q8N4Z0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB42Q8N4Z0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB42Q8N4Z0 AL356740.2-201ENST00000601559 647 ntBASIC22.05■■□□□ 1.12
RAB42Q8N4Z0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB42Q8N4Z0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB42Q8N4Z0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB42Q8N4Z0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.04■■□□□ 1.12
RAB42Q8N4Z0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB42Q8N4Z0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.03■■□□□ 1.12
RAB42Q8N4Z0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAB42Q8N4Z0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAB42Q8N4Z0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RAB42Q8N4Z0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.03■■□□□ 1.12
RAB42Q8N4Z0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAB42Q8N4Z0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAB42Q8N4Z0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 AC093323.1-202ENST00000635031 2045 ntBASIC22.02■■□□□ 1.12
RAB42Q8N4Z0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RAB42Q8N4Z0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 ABCB10P4-201ENST00000566803 2184 ntBASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB42Q8N4Z0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAB42Q8N4Z0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAB42Q8N4Z0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RAB42Q8N4Z0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RAB42Q8N4Z0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAB42Q8N4Z0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAB42Q8N4Z0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAB42Q8N4Z0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22■■□□□ 1.11
RAB42Q8N4Z0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAB42Q8N4Z0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 AL117332.1-201ENST00000622628 974 ntBASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB42Q8N4Z0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.98■■□□□ 1.11
RAB42Q8N4Z0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RAB42Q8N4Z0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
RAB42Q8N4Z0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB42Q8N4Z0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB42Q8N4Z0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RAB42Q8N4Z0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 MIR3621-201ENST00000580529 85 ntBASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 AC131212.1-201ENST00000613771 668 ntBASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB42Q8N4Z0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RAB42Q8N4Z0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB42Q8N4Z0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms