Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LYSMD2Q8IV50 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LYSMD2Q8IV50 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L13-201ENST00000554103 1267 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L15-201ENST00000611059 1267 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L23-201ENST00000615195 1269 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L24-201ENST00000617576 1269 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L22-201ENST00000618238 1269 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L20-201ENST00000619712 1269 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L21-201ENST00000622058 1269 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L10-201ENST00000622460 1267 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 DUX4L25-201ENST00000624915 1269 ntBASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LYSMD2Q8IV50 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LYSMD2Q8IV50 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LYSMD2Q8IV50 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LYSMD2Q8IV50 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.89■□□□□ 0.77
LYSMD2Q8IV50 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.89■□□□□ 0.77
LYSMD2Q8IV50 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.89■□□□□ 0.77
LYSMD2Q8IV50 PKD1P6-201ENST00000343738 4769 ntBASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 C11orf96-202ENST00000528572 1834 ntBASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
LYSMD2Q8IV50 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 AC026310.3-201ENST00000625186 2373 ntBASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 LINC01971-201ENST00000617888 1048 ntBASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LYSMD2Q8IV50 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 ESRRAP2-201ENST00000418437 1549 ntBASIC19.86■□□□□ 0.77
LYSMD2Q8IV50 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms