Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 RASA4CP-201ENST00000424092 1398 ntBASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 AC027682.1-201ENST00000562846 899 ntBASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 AC008764.7-201ENST00000593779 1081 ntBASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.11■■□□□ 1.77
SNRNP48Q6IEG0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 AC135731.1-201ENST00000569415 2548 ntBASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
SNRNP48Q6IEG0 AC136469.2-201ENST00000623944 1028 ntBASIC26.09■■□□□ 1.77
SNRNP48Q6IEG0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.09■■□□□ 1.77
SNRNP48Q6IEG0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.09■■□□□ 1.77
SNRNP48Q6IEG0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
SNRNP48Q6IEG0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNRNP48Q6IEG0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNRNP48Q6IEG0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNRNP48Q6IEG0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.08■■□□□ 1.77
SNRNP48Q6IEG0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 AP003733.4-201ENST00000623785 1697 ntBASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 MIR3181-201ENST00000578512 73 ntBASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.07■■□□□ 1.76
SNRNP48Q6IEG0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
SNRNP48Q6IEG0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.06■■□□□ 1.76
SNRNP48Q6IEG0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNRNP48Q6IEG0 AC099791.1-201ENST00000416440 715 ntBASIC26.06■■□□□ 1.76
SNRNP48Q6IEG0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.06■■□□□ 1.76
SNRNP48Q6IEG0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNRNP48Q6IEG0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP48Q6IEG0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP48Q6IEG0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP48Q6IEG0 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.05■■□□□ 1.76
SNRNP48Q6IEG0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.05■■□□□ 1.76
SNRNP48Q6IEG0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNRNP48Q6IEG0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SNRNP48Q6IEG0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.03■■□□□ 1.76
SNRNP48Q6IEG0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SNRNP48Q6IEG0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SNRNP48Q6IEG0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.03■■□□□ 1.76
SNRNP48Q6IEG0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNRNP48Q6IEG0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 MIR5787-201ENST00000611784 55 ntBASIC26.01■■□□□ 1.75
SNRNP48Q6IEG0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 pRNA.6-201ENST00000610482 90 ntBASIC26■■□□□ 1.75
SNRNP48Q6IEG0 pRNA.5-201ENST00000612139 90 ntBASIC26■■□□□ 1.75
SNRNP48Q6IEG0 pRNA.11-201ENST00000618423 90 ntBASIC26■■□□□ 1.75
SNRNP48Q6IEG0 pRNA.13-201ENST00000619112 90 ntBASIC26■■□□□ 1.75
SNRNP48Q6IEG0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNRNP48Q6IEG0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.99■■□□□ 1.75
SNRNP48Q6IEG0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms