Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MIR4497-201ENST00000583208 89 ntBASIC12.76□□□□□ -0.37
UBR4Q5T4S7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 AC073210.2-201ENST00000430369 194 ntBASIC12.76□□□□□ -0.37
UBR4Q5T4S7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
UBR4Q5T4S7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AC092171.4-201ENST00000609130 632 ntBASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AC009102.2-201ENST00000606772 1639 ntBASIC12.75□□□□□ -0.37
UBR4Q5T4S7 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
UBR4Q5T4S7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 LINC02228-203ENST00000641970 1355 ntBASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 AC126544.1-201ENST00000580842 1059 ntBASIC12.74□□□□□ -0.37
UBR4Q5T4S7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 LINC01023-201ENST00000606054 436 ntBASIC12.74□□□□□ -0.37
UBR4Q5T4S7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
UBR4Q5T4S7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 IGHV3-19-201ENST00000521488 291 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 UNC93B4-201ENST00000505679 747 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 AC008550.1-201ENST00000511500 884 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
UBR4Q5T4S7 AL158047.1-201ENST00000445918 881 ntBASIC12.73□□□□□ -0.37
UBR4Q5T4S7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 SLC7A5P1-201ENST00000568957 537 ntBASIC12.72□□□□□ -0.37
UBR4Q5T4S7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
UBR4Q5T4S7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 AC128676.1-201ENST00000454392 318 ntBASIC12.71□□□□□ -0.37
UBR4Q5T4S7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 RCN1P1-201ENST00000400413 996 ntBASIC12.71□□□□□ -0.37
UBR4Q5T4S7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
UBR4Q5T4S7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
UBR4Q5T4S7 AC131274.2-201ENST00000580697 1507 ntBASIC12.71□□□□□ -0.38
UBR4Q5T4S7 SLC29A4P1-201ENST00000398760 971 ntBASIC12.7□□□□□ -0.38
UBR4Q5T4S7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.7□□□□□ -0.38
UBR4Q5T4S7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms