Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC37.81■■■■□ 3.64
SNAPC4Q5SXM2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC37.81■■■■□ 3.64
SNAPC4Q5SXM2 ERN1-208ENST00000606895 2068 ntBASIC37.81■■■■□ 3.64
SNAPC4Q5SXM2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC37.8■■■■□ 3.64
SNAPC4Q5SXM2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC37.8■■■■□ 3.64
SNAPC4Q5SXM2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
SNAPC4Q5SXM2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC37.8■■■■□ 3.64
SNAPC4Q5SXM2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
SNAPC4Q5SXM2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC37.79■■■■□ 3.64
SNAPC4Q5SXM2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC37.79■■■■□ 3.64
SNAPC4Q5SXM2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC37.79■■■■□ 3.64
SNAPC4Q5SXM2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC37.79■■■■□ 3.64
SNAPC4Q5SXM2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
SNAPC4Q5SXM2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
SNAPC4Q5SXM2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC37.78■■■■□ 3.64
SNAPC4Q5SXM2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC37.78■■■■□ 3.64
SNAPC4Q5SXM2 AC006015.1-201ENST00000429970 570 ntBASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 GXYLT1P5-201ENST00000614548 1189 ntBASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 AC073111.5-205ENST00000641717 521 ntBASIC37.77■■■■□ 3.64
SNAPC4Q5SXM2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
SNAPC4Q5SXM2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC37.76■■■■□ 3.64
SNAPC4Q5SXM2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC37.76■■■■□ 3.63
SNAPC4Q5SXM2 AC104771.1-201ENST00000603335 964 ntBASIC37.76■■■■□ 3.63
SNAPC4Q5SXM2 AC080038.1-201ENST00000611274 1154 ntBASIC37.76■■■■□ 3.63
SNAPC4Q5SXM2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC37.76■■■■□ 3.63
SNAPC4Q5SXM2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.63
SNAPC4Q5SXM2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
SNAPC4Q5SXM2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC37.75■■■■□ 3.63
SNAPC4Q5SXM2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC37.75■■■■□ 3.63
SNAPC4Q5SXM2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC37.75■■■■□ 3.63
SNAPC4Q5SXM2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC37.75■■■■□ 3.63
SNAPC4Q5SXM2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC37.74■■■■□ 3.63
SNAPC4Q5SXM2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC37.74■■■■□ 3.63
SNAPC4Q5SXM2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
SNAPC4Q5SXM2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
SNAPC4Q5SXM2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
SNAPC4Q5SXM2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
SNAPC4Q5SXM2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC37.73■■■■□ 3.63
SNAPC4Q5SXM2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC37.73■■■■□ 3.63
SNAPC4Q5SXM2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC37.73■■■■□ 3.63
SNAPC4Q5SXM2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC37.72■■■■□ 3.63
SNAPC4Q5SXM2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC37.72■■■■□ 3.63
SNAPC4Q5SXM2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
SNAPC4Q5SXM2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
SNAPC4Q5SXM2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
SNAPC4Q5SXM2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC37.72■■■■□ 3.63
SNAPC4Q5SXM2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 CDCA4P2-201ENST00000441182 718 ntBASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC37.71■■■■□ 3.63
SNAPC4Q5SXM2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 LINC02228-203ENST00000641970 1355 ntBASIC37.7■■■■□ 3.63
SNAPC4Q5SXM2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC37.7■■■■□ 3.62
SNAPC4Q5SXM2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC37.69■■■■□ 3.62
SNAPC4Q5SXM2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
SNAPC4Q5SXM2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
SNAPC4Q5SXM2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC37.68■■■■□ 3.62
SNAPC4Q5SXM2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC37.67■■■■□ 3.62
SNAPC4Q5SXM2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC37.67■■■■□ 3.62
SNAPC4Q5SXM2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC37.67■■■■□ 3.62
SNAPC4Q5SXM2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC37.67■■■■□ 3.62
SNAPC4Q5SXM2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC37.67■■■■□ 3.62
SNAPC4Q5SXM2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
SNAPC4Q5SXM2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC37.66■■■■□ 3.62
SNAPC4Q5SXM2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC37.66■■■■□ 3.62
SNAPC4Q5SXM2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC37.66■■■■□ 3.62
SNAPC4Q5SXM2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC37.66■■■■□ 3.62
SNAPC4Q5SXM2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC37.66■■■■□ 3.62
SNAPC4Q5SXM2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC37.66■■■■□ 3.62
SNAPC4Q5SXM2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC37.65■■■■□ 3.62
SNAPC4Q5SXM2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC37.65■■■■□ 3.62
SNAPC4Q5SXM2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
SNAPC4Q5SXM2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
SNAPC4Q5SXM2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC37.65■■■■□ 3.62
SNAPC4Q5SXM2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
SNAPC4Q5SXM2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC37.64■■■■□ 3.62
SNAPC4Q5SXM2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC37.64■■■■□ 3.62
SNAPC4Q5SXM2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC37.64■■■■□ 3.62
SNAPC4Q5SXM2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
SNAPC4Q5SXM2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC37.64■■■■□ 3.62
SNAPC4Q5SXM2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC37.64■■■■□ 3.62
SNAPC4Q5SXM2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms