Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.21■■□□□ 1.63
TRIM60Q495X7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
TRIM60Q495X7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.2■■□□□ 1.62
TRIM60Q495X7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
TRIM60Q495X7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.2■■□□□ 1.62
TRIM60Q495X7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.2■■□□□ 1.62
TRIM60Q495X7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.2■■□□□ 1.62
TRIM60Q495X7 CCDC92B-201ENST00000575506 885 ntBASIC25.2■■□□□ 1.62
TRIM60Q495X7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TRIM60Q495X7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRIM60Q495X7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
TRIM60Q495X7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM60Q495X7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM60Q495X7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.19■■□□□ 1.62
TRIM60Q495X7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM60Q495X7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.19■■□□□ 1.62
TRIM60Q495X7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.19■■□□□ 1.62
TRIM60Q495X7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM60Q495X7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TRIM60Q495X7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.18■■□□□ 1.62
TRIM60Q495X7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM60Q495X7 AC012414.1-201ENST00000556676 535 ntBASIC25.18■■□□□ 1.62
TRIM60Q495X7 NTF6G-201ENST00000591094 616 ntBASIC25.18■■□□□ 1.62
TRIM60Q495X7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM60Q495X7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRIM60Q495X7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM60Q495X7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM60Q495X7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.17■■□□□ 1.62
TRIM60Q495X7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.17■■□□□ 1.62
TRIM60Q495X7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM60Q495X7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
TRIM60Q495X7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM60Q495X7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRIM60Q495X7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.17■■□□□ 1.62
TRIM60Q495X7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.17■■□□□ 1.62
TRIM60Q495X7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.17■■□□□ 1.62
TRIM60Q495X7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
TRIM60Q495X7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRIM60Q495X7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
TRIM60Q495X7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.16■■□□□ 1.62
TRIM60Q495X7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.16■■□□□ 1.62
TRIM60Q495X7 HLA-L-209ENST00000420110 1011 ntBASIC25.16■■□□□ 1.62
TRIM60Q495X7 IGHV3-19-201ENST00000521488 291 ntBASIC25.16■■□□□ 1.62
TRIM60Q495X7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.15■■□□□ 1.62
TRIM60Q495X7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.15■■□□□ 1.62
TRIM60Q495X7 MIR572-201ENST00000384983 95 ntBASIC25.15■■□□□ 1.62
TRIM60Q495X7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
TRIM60Q495X7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.15■■□□□ 1.62
TRIM60Q495X7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRIM60Q495X7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM60Q495X7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
TRIM60Q495X7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
TRIM60Q495X7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.14■■□□□ 1.62
TRIM60Q495X7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.14■■□□□ 1.62
TRIM60Q495X7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.14■■□□□ 1.61
TRIM60Q495X7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM60Q495X7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM60Q495X7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM60Q495X7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM60Q495X7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.13■■□□□ 1.61
TRIM60Q495X7 AL354811.1-201ENST00000610286 706 ntBASIC25.13■■□□□ 1.61
TRIM60Q495X7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.13■■□□□ 1.61
TRIM60Q495X7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
TRIM60Q495X7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM60Q495X7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
TRIM60Q495X7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM60Q495X7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRIM60Q495X7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
TRIM60Q495X7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.12■■□□□ 1.61
TRIM60Q495X7 KRT18P14-201ENST00000534205 1250 ntBASIC25.12■■□□□ 1.61
TRIM60Q495X7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRIM60Q495X7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM60Q495X7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.11■■□□□ 1.61
TRIM60Q495X7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM60Q495X7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.11■■□□□ 1.61
TRIM60Q495X7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.11■■□□□ 1.61
TRIM60Q495X7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM60Q495X7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.11■■□□□ 1.61
TRIM60Q495X7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
TRIM60Q495X7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TRIM60Q495X7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
TRIM60Q495X7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.1■■□□□ 1.61
TRIM60Q495X7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
TRIM60Q495X7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.1■■□□□ 1.61
TRIM60Q495X7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM60Q495X7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.1■■□□□ 1.61
TRIM60Q495X7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.1■■□□□ 1.61
TRIM60Q495X7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
TRIM60Q495X7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.1■■□□□ 1.61
TRIM60Q495X7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRIM60Q495X7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.09■■□□□ 1.61
TRIM60Q495X7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms