Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.7■□□□□ 0.74
TBC1D28Q2M2D7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D28Q2M2D7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.69■□□□□ 0.74
TBC1D28Q2M2D7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D28Q2M2D7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D28Q2M2D7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D28Q2M2D7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
TBC1D28Q2M2D7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TBC1D28Q2M2D7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D28Q2M2D7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TBC1D28Q2M2D7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D28Q2M2D7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D28Q2M2D7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.68■□□□□ 0.74
TBC1D28Q2M2D7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TBC1D28Q2M2D7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.68■□□□□ 0.74
TBC1D28Q2M2D7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 AL356740.2-201ENST00000601559 647 ntBASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TBC1D28Q2M2D7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TBC1D28Q2M2D7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TBC1D28Q2M2D7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TBC1D28Q2M2D7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D28Q2M2D7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D28Q2M2D7 AL117332.1-201ENST00000622628 974 ntBASIC19.64■□□□□ 0.73
TBC1D28Q2M2D7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TBC1D28Q2M2D7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TBC1D28Q2M2D7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.63■□□□□ 0.73
TBC1D28Q2M2D7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 AC131212.1-201ENST00000613771 668 ntBASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D28Q2M2D7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 MIR3621-201ENST00000580529 85 ntBASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D28Q2M2D7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms