Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.97
CNTNAP1P78357 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.97
CNTNAP1P78357 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.39■■□□□ 1.97
CNTNAP1P78357 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.39■■□□□ 1.97
CNTNAP1P78357 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNTNAP1P78357 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNTNAP1P78357 AC027612.3-201ENST00000413684 1047 ntBASIC27.38■■□□□ 1.97
CNTNAP1P78357 BX842568.3-201ENST00000418104 571 ntBASIC27.38■■□□□ 1.97
CNTNAP1P78357 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.38■■□□□ 1.97
CNTNAP1P78357 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CNTNAP1P78357 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNTNAP1P78357 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNTNAP1P78357 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CNTNAP1P78357 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.37■■□□□ 1.97
CNTNAP1P78357 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.37■■□□□ 1.97
CNTNAP1P78357 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CNTNAP1P78357 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.37■■□□□ 1.97
CNTNAP1P78357 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CNTNAP1P78357 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.37■■□□□ 1.97
CNTNAP1P78357 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CNTNAP1P78357 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CNTNAP1P78357 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CNTNAP1P78357 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.36■■□□□ 1.97
CNTNAP1P78357 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.36■■□□□ 1.97
CNTNAP1P78357 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CNTNAP1P78357 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CNTNAP1P78357 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CNTNAP1P78357 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CNTNAP1P78357 HES6-206ENST00000409574 738 ntTSL 2 BASIC27.35■■□□□ 1.97
CNTNAP1P78357 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.35■■□□□ 1.97
CNTNAP1P78357 AC245100.8-202ENST00000629247 1058 ntBASIC27.35■■□□□ 1.97
CNTNAP1P78357 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.35■■□□□ 1.97
CNTNAP1P78357 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CNTNAP1P78357 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CNTNAP1P78357 AC009102.2-201ENST00000606772 1639 ntBASIC27.35■■□□□ 1.97
CNTNAP1P78357 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.35■■□□□ 1.97
CNTNAP1P78357 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.35■■□□□ 1.97
CNTNAP1P78357 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CNTNAP1P78357 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CNTNAP1P78357 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CNTNAP1P78357 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CNTNAP1P78357 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.34■■□□□ 1.97
CNTNAP1P78357 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.34■■□□□ 1.97
CNTNAP1P78357 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.34■■□□□ 1.97
CNTNAP1P78357 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.33■■□□□ 1.97
CNTNAP1P78357 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CNTNAP1P78357 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CNTNAP1P78357 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CNTNAP1P78357 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.33■■□□□ 1.97
CNTNAP1P78357 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.33■■□□□ 1.97
CNTNAP1P78357 NTF6G-201ENST00000591094 616 ntBASIC27.33■■□□□ 1.97
CNTNAP1P78357 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
CNTNAP1P78357 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CNTNAP1P78357 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CNTNAP1P78357 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CNTNAP1P78357 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CNTNAP1P78357 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.32■■□□□ 1.96
CNTNAP1P78357 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.32■■□□□ 1.96
CNTNAP1P78357 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CNTNAP1P78357 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.32■■□□□ 1.96
CNTNAP1P78357 DUSP8P4-201ENST00000399538 1761 ntBASIC27.32■■□□□ 1.96
CNTNAP1P78357 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC27.32■■□□□ 1.96
CNTNAP1P78357 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CNTNAP1P78357 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CNTNAP1P78357 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CNTNAP1P78357 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.31■■□□□ 1.96
CNTNAP1P78357 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.31■■□□□ 1.96
CNTNAP1P78357 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.31■■□□□ 1.96
CNTNAP1P78357 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNTNAP1P78357 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNTNAP1P78357 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNTNAP1P78357 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNTNAP1P78357 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
CNTNAP1P78357 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.3■■□□□ 1.96
CNTNAP1P78357 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.3■■□□□ 1.96
CNTNAP1P78357 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNTNAP1P78357 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNTNAP1P78357 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CNTNAP1P78357 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.29■■□□□ 1.96
CNTNAP1P78357 CCDC92B-201ENST00000575506 885 ntBASIC27.29■■□□□ 1.96
CNTNAP1P78357 RAP2CP1-201ENST00000605103 478 ntBASIC27.29■■□□□ 1.96
CNTNAP1P78357 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.29■■□□□ 1.96
CNTNAP1P78357 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CNTNAP1P78357 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
CNTNAP1P78357 C17orf82-201ENST00000623772 1530 ntBASIC27.28■■□□□ 1.96
CNTNAP1P78357 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CNTNAP1P78357 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CNTNAP1P78357 AL358852.1-201ENST00000623174 1268 ntBASIC27.28■■□□□ 1.96
CNTNAP1P78357 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CNTNAP1P78357 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CNTNAP1P78357 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.27■■□□□ 1.96
CNTNAP1P78357 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CNTNAP1P78357 AC104771.1-201ENST00000603335 964 ntBASIC27.27■■□□□ 1.96
CNTNAP1P78357 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CNTNAP1P78357 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.27■■□□□ 1.96
CNTNAP1P78357 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CNTNAP1P78357 AC080038.1-201ENST00000611274 1154 ntBASIC27.26■■□□□ 1.95
CNTNAP1P78357 AL022069.1-201ENST00000568025 1636 ntBASIC27.26■■□□□ 1.95
CNTNAP1P78357 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CNTNAP1P78357 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms