Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
LSM6P62312 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM6P62312 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.92■□□□□ 0.78
LSM6P62312 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LSM6P62312 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM6P62312 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LSM6P62312 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.92■□□□□ 0.78
LSM6P62312 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LSM6P62312 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
LSM6P62312 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 Z92544.1-202ENST00000571933 1220 ntBASIC19.91■□□□□ 0.78
LSM6P62312 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.91■□□□□ 0.78
LSM6P62312 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.91■□□□□ 0.78
LSM6P62312 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM6P62312 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LSM6P62312 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LSM6P62312 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 RARRES2P1-201ENST00000474487 481 ntBASIC19.9■□□□□ 0.78
LSM6P62312 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.9■□□□□ 0.78
LSM6P62312 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.9■□□□□ 0.78
LSM6P62312 MIR6722-201ENST00000617286 78 ntBASIC19.9■□□□□ 0.78
LSM6P62312 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.9■□□□□ 0.78
LSM6P62312 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LSM6P62312 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM6P62312 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM6P62312 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM6P62312 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.89■□□□□ 0.77
LSM6P62312 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM6P62312 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSM6P62312 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSM6P62312 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSM6P62312 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.89■□□□□ 0.77
LSM6P62312 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM6P62312 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LSM6P62312 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM6P62312 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM6P62312 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LSM6P62312 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM6P62312 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LSM6P62312 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LSM6P62312 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.88■□□□□ 0.77
LSM6P62312 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LSM6P62312 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LSM6P62312 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
LSM6P62312 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LSM6P62312 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSM6P62312 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.87■□□□□ 0.77
LSM6P62312 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSM6P62312 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LSM6P62312 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSM6P62312 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.87■□□□□ 0.77
LSM6P62312 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.87■□□□□ 0.77
LSM6P62312 KRT125P-201ENST00000546827 989 ntBASIC19.87■□□□□ 0.77
LSM6P62312 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSM6P62312 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSM6P62312 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LSM6P62312 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LSM6P62312 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
LSM6P62312 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LSM6P62312 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSM6P62312 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSM6P62312 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSM6P62312 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.86■□□□□ 0.77
LSM6P62312 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSM6P62312 DUSP8P3-201ENST00000399571 1760 ntBASIC19.86■□□□□ 0.77
LSM6P62312 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSM6P62312 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.86■□□□□ 0.77
LSM6P62312 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.86■□□□□ 0.77
LSM6P62312 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LSM6P62312 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.86■□□□□ 0.77
LSM6P62312 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LSM6P62312 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.86■□□□□ 0.77
LSM6P62312 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.86■□□□□ 0.77
LSM6P62312 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms