Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM3P62310 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LSM3P62310 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM3P62310 AC021231.2-201ENST00000594613 730 ntBASIC20.41■□□□□ 0.86
LSM3P62310 AC148477.6-201ENST00000623746 465 ntBASIC20.41■□□□□ 0.86
LSM3P62310 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM3P62310 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM3P62310 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM3P62310 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM3P62310 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LSM3P62310 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LSM3P62310 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LSM3P62310 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM3P62310 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM3P62310 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM3P62310 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSM3P62310 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
LSM3P62310 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.4■□□□□ 0.86
LSM3P62310 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.4■□□□□ 0.86
LSM3P62310 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM3P62310 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM3P62310 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LSM3P62310 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
LSM3P62310 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LSM3P62310 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.39■□□□□ 0.86
LSM3P62310 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LSM3P62310 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LSM3P62310 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
LSM3P62310 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.39■□□□□ 0.85
LSM3P62310 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM3P62310 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM3P62310 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LSM3P62310 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM3P62310 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LSM3P62310 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM3P62310 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM3P62310 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LSM3P62310 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LSM3P62310 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM3P62310 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.38■□□□□ 0.85
LSM3P62310 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LSM3P62310 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.38■□□□□ 0.85
LSM3P62310 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.38■□□□□ 0.85
LSM3P62310 AC242852.2-201ENST00000615738 1807 ntBASIC20.38■□□□□ 0.85
LSM3P62310 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM3P62310 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.38■□□□□ 0.85
LSM3P62310 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM3P62310 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.37■□□□□ 0.85
LSM3P62310 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LSM3P62310 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.37■□□□□ 0.85
LSM3P62310 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 AC008813.1-201ENST00000536597 885 ntBASIC20.37■□□□□ 0.85
LSM3P62310 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.37■□□□□ 0.85
LSM3P62310 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.37■□□□□ 0.85
LSM3P62310 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.37■□□□□ 0.85
LSM3P62310 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM3P62310 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
LSM3P62310 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM3P62310 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
LSM3P62310 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.36■□□□□ 0.85
LSM3P62310 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM3P62310 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM3P62310 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM3P62310 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LSM3P62310 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.36■□□□□ 0.85
LSM3P62310 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSM3P62310 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.36■□□□□ 0.85
LSM3P62310 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM3P62310 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.36■□□□□ 0.85
LSM3P62310 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.36■□□□□ 0.85
LSM3P62310 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM3P62310 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.35■□□□□ 0.85
LSM3P62310 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM3P62310 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
LSM3P62310 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM3P62310 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM3P62310 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM3P62310 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM3P62310 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
LSM3P62310 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM3P62310 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM3P62310 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM3P62310 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM3P62310 AC087741.3-201ENST00000624270 1347 ntBASIC20.33■□□□□ 0.85
LSM3P62310 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM3P62310 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms