Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
KCNQ4P56696 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
KCNQ4P56696 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.38■■■□□ 2.29
KCNQ4P56696 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.38■■■□□ 2.29
KCNQ4P56696 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.38■■■□□ 2.29
KCNQ4P56696 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
KCNQ4P56696 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC29.37■■■□□ 2.29
KCNQ4P56696 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
KCNQ4P56696 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
KCNQ4P56696 AC027612.3-201ENST00000413684 1047 ntBASIC29.37■■■□□ 2.29
KCNQ4P56696 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
KCNQ4P56696 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
KCNQ4P56696 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.37■■■□□ 2.29
KCNQ4P56696 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
KCNQ4P56696 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
KCNQ4P56696 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.37■■■□□ 2.29
KCNQ4P56696 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
KCNQ4P56696 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
KCNQ4P56696 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.36■■■□□ 2.29
KCNQ4P56696 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.36■■■□□ 2.29
KCNQ4P56696 NTF6G-201ENST00000591094 616 ntBASIC29.36■■■□□ 2.29
KCNQ4P56696 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
KCNQ4P56696 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.35■■■□□ 2.29
KCNQ4P56696 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
KCNQ4P56696 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.34■■■□□ 2.29
KCNQ4P56696 SLC6A10P-202ENST00000431994 2058 ntBASIC29.34■■■□□ 2.29
KCNQ4P56696 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.34■■■□□ 2.29
KCNQ4P56696 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC29.34■■■□□ 2.29
KCNQ4P56696 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
KCNQ4P56696 AC123595.1-201ENST00000440769 1046 ntBASIC29.34■■■□□ 2.29
KCNQ4P56696 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
KCNQ4P56696 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
KCNQ4P56696 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
KCNQ4P56696 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
KCNQ4P56696 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.34■■■□□ 2.29
KCNQ4P56696 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
KCNQ4P56696 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.33■■■□□ 2.29
KCNQ4P56696 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.33■■■□□ 2.29
KCNQ4P56696 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
KCNQ4P56696 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
KCNQ4P56696 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
KCNQ4P56696 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
KCNQ4P56696 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.33■■■□□ 2.29
KCNQ4P56696 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
KCNQ4P56696 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
KCNQ4P56696 AL358852.1-201ENST00000623174 1268 ntBASIC29.32■■■□□ 2.28
KCNQ4P56696 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.32■■■□□ 2.28
KCNQ4P56696 AL022069.1-201ENST00000568025 1636 ntBASIC29.31■■■□□ 2.28
KCNQ4P56696 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.31■■■□□ 2.28
KCNQ4P56696 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
KCNQ4P56696 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
KCNQ4P56696 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
KCNQ4P56696 ME3-201ENST00000323418 1068 ntTSL 5 BASIC29.3■■■□□ 2.28
KCNQ4P56696 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.3■■■□□ 2.28
KCNQ4P56696 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.3■■■□□ 2.28
KCNQ4P56696 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
KCNQ4P56696 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.3■■■□□ 2.28
KCNQ4P56696 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
KCNQ4P56696 AC012414.1-201ENST00000556676 535 ntBASIC29.29■■■□□ 2.28
KCNQ4P56696 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.29■■■□□ 2.28
KCNQ4P56696 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
KCNQ4P56696 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
KCNQ4P56696 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
KCNQ4P56696 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
KCNQ4P56696 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.28■■■□□ 2.28
KCNQ4P56696 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC29.28■■■□□ 2.28
KCNQ4P56696 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
KCNQ4P56696 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
KCNQ4P56696 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
KCNQ4P56696 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
KCNQ4P56696 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.27■■■□□ 2.28
KCNQ4P56696 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.27■■■□□ 2.28
KCNQ4P56696 KRT18P14-201ENST00000534205 1250 ntBASIC29.27■■■□□ 2.28
KCNQ4P56696 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNQ4P56696 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
KCNQ4P56696 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
KCNQ4P56696 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
KCNQ4P56696 MIR572-201ENST00000384983 95 ntBASIC29.26■■■□□ 2.27
KCNQ4P56696 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
KCNQ4P56696 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
KCNQ4P56696 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
KCNQ4P56696 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.26■■■□□ 2.27
KCNQ4P56696 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
KCNQ4P56696 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
KCNQ4P56696 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
KCNQ4P56696 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
KCNQ4P56696 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
KCNQ4P56696 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC29.25■■■□□ 2.27
KCNQ4P56696 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.25■■■□□ 2.27
KCNQ4P56696 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.25■■■□□ 2.27
KCNQ4P56696 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC29.25■■■□□ 2.27
KCNQ4P56696 IGHV3-19-201ENST00000521488 291 ntBASIC29.25■■■□□ 2.27
KCNQ4P56696 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
KCNQ4P56696 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
KCNQ4P56696 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNQ4P56696 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC29.24■■■□□ 2.27
KCNQ4P56696 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNQ4P56696 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
KCNQ4P56696 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
KCNQ4P56696 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms