Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM50BP56557 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM50BP56557 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM50BP56557 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TMEM50BP56557 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM50BP56557 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM50BP56557 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM50BP56557 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.24■□□□□ 0.67
TMEM50BP56557 LONRF2P2-201ENST00000439212 571 ntBASIC19.24■□□□□ 0.67
TMEM50BP56557 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM50BP56557 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM50BP56557 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM50BP56557 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM50BP56557 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM50BP56557 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM50BP56557 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM50BP56557 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM50BP56557 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM50BP56557 AC131274.2-201ENST00000580697 1507 ntBASIC19.23■□□□□ 0.67
TMEM50BP56557 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TMEM50BP56557 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM50BP56557 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM50BP56557 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM50BP56557 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM50BP56557 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM50BP56557 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM50BP56557 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM50BP56557 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM50BP56557 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.22■□□□□ 0.67
TMEM50BP56557 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM50BP56557 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM50BP56557 GUSBP5-202ENST00000510805 1989 ntBASIC19.22■□□□□ 0.67
TMEM50BP56557 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM50BP56557 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM50BP56557 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM50BP56557 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM50BP56557 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
TMEM50BP56557 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM50BP56557 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM50BP56557 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM50BP56557 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TMEM50BP56557 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TMEM50BP56557 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM50BP56557 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TMEM50BP56557 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM50BP56557 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM50BP56557 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM50BP56557 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM50BP56557 ALDH1A3-203ENST00000557963 1670 ntBASIC19.2■□□□□ 0.66
TMEM50BP56557 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM50BP56557 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 LINC00526-201ENST00000581067 1875 ntBASIC19.2■□□□□ 0.66
TMEM50BP56557 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEM50BP56557 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM50BP56557 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM50BP56557 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM50BP56557 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMEM50BP56557 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM50BP56557 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM50BP56557 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM50BP56557 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM50BP56557 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.19■□□□□ 0.66
TMEM50BP56557 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMEM50BP56557 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM50BP56557 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM50BP56557 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM50BP56557 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM50BP56557 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM50BP56557 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMEM50BP56557 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMEM50BP56557 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMEM50BP56557 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM50BP56557 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMEM50BP56557 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM50BP56557 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM50BP56557 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM50BP56557 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM50BP56557 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM50BP56557 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM50BP56557 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM50BP56557 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM50BP56557 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM50BP56557 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM50BP56557 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM50BP56557 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM50BP56557 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM50BP56557 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TMEM50BP56557 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM50BP56557 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM50BP56557 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms