Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH12P55289 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDH12P55289 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH12P55289 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDH12P55289 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH12P55289 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDH12P55289 AL161729.1-201ENST00000604104 1402 ntBASIC21.05■□□□□ 0.96
CDH12P55289 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH12P55289 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH12P55289 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH12P55289 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CDH12P55289 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH12P55289 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDH12P55289 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH12P55289 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH12P55289 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH12P55289 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 AC019171.1-201ENST00000601251 1056 ntBASIC21.04■□□□□ 0.96
CDH12P55289 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH12P55289 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CDH12P55289 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH12P55289 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH12P55289 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH12P55289 C1orf229-201ENST00000623686 2258 ntBASIC21.03■□□□□ 0.96
CDH12P55289 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH12P55289 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
CDH12P55289 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH12P55289 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.03■□□□□ 0.96
CDH12P55289 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH12P55289 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH12P55289 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CDH12P55289 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH12P55289 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH12P55289 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CDH12P55289 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH12P55289 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH12P55289 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CDH12P55289 AC004987.1-201ENST00000428627 508 ntBASIC21.02■□□□□ 0.96
CDH12P55289 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.02■□□□□ 0.96
CDH12P55289 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.02■□□□□ 0.96
CDH12P55289 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDH12P55289 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDH12P55289 EP400NL-214ENST00000641289 2402 ntBASIC21.02■□□□□ 0.95
CDH12P55289 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CDH12P55289 CLDN5-201ENST00000403084 2357 ntBASIC21.01■□□□□ 0.95
CDH12P55289 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH12P55289 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH12P55289 ATP5G2P3-201ENST00000429083 425 ntBASIC21.01■□□□□ 0.95
CDH12P55289 AC011551.1-201ENST00000614101 683 ntBASIC21.01■□□□□ 0.95
CDH12P55289 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CDH12P55289 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH12P55289 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH12P55289 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CDH12P55289 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDH12P55289 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH12P55289 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDH12P55289 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDH12P55289 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH12P55289 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21■□□□□ 0.95
CDH12P55289 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH12P55289 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDH12P55289 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CDH12P55289 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CDH12P55289 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21■□□□□ 0.95
CDH12P55289 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDH12P55289 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDH12P55289 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CDH12P55289 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CDH12P55289 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDH12P55289 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 AC022616.5-201ENST00000518796 181 ntBASIC20.99■□□□□ 0.95
CDH12P55289 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.99■□□□□ 0.95
CDH12P55289 BHLHE23-202ENST00000612929 1109 ntBASIC20.99■□□□□ 0.95
CDH12P55289 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CDH12P55289 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CDH12P55289 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDH12P55289 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDH12P55289 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDH12P55289 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CDH12P55289 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms