Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 COX26YDR119W-A 201 nt6.43□□□□□ -1.38
MSH4P40965 CAD1YDR423C 1230 nt6.43□□□□□ -1.38
MSH4P40965 RPN9YDR427W 1182 nt6.43□□□□□ -1.38
MSH4P40965 YJL032WYJL032W 315 nt6.43□□□□□ -1.38
MSH4P40965 UIP3YAR027W 708 nt6.43□□□□□ -1.38
MSH4P40965 YNR025CYNR025C 360 nt6.43□□□□□ -1.38
MSH4P40965 POC4YPL144W 447 nt6.43□□□□□ -1.38
MSH4P40965 TGS1YPL157W 948 nt6.43□□□□□ -1.38
MSH4P40965 RSM10YDR041W 612 nt6.42□□□□□ -1.38
MSH4P40965 SLO1YER180C-A 258 nt6.42□□□□□ -1.38
MSH4P40965 MOB2YFL034C-B 864 nt6.42□□□□□ -1.38
MSH4P40965 CIR1YGR207C 786 nt6.42□□□□□ -1.38
MSH4P40965 YHR214WYHR214W 612 nt6.42□□□□□ -1.38
MSH4P40965 PHO86YJL117W 936 nt6.42□□□□□ -1.38
MSH4P40965 TFS1YLR178C 660 nt6.42□□□□□ -1.38
MSH4P40965 YAR066WYAR066W 612 nt6.42□□□□□ -1.38
MSH4P40965 REX4YOL080C 870 nt6.42□□□□□ -1.38
MSH4P40965 IPP1YBR011C 864 nt6.42□□□□□ -1.38
MSH4P40965 ATP1YBL099W 1638 nt6.41□□□□□ -1.38
MSH4P40965 NBP2YDR162C 711 nt6.41□□□□□ -1.38
MSH4P40965 YGL177WYGL177W 348 nt6.41□□□□□ -1.38
MSH4P40965 YGL258W-AYGL258W-A 234 nt6.41□□□□□ -1.38
MSH4P40965 SPO11YHL022C 1197 nt6.41□□□□□ -1.38
MSH4P40965 CDC8YJR057W 651 nt6.41□□□□□ -1.38
MSH4P40965 SFK1YKL051W 1062 nt6.41□□□□□ -1.38
MSH4P40965 TVP38YKR088C 1014 nt6.41□□□□□ -1.38
MSH4P40965 YLR225CYLR225C 1224 nt6.41□□□□□ -1.38
MSH4P40965 ATG16YMR159C 453 nt6.41□□□□□ -1.38
MSH4P40965 YPL191CYPL191C 1083 nt6.41□□□□□ -1.38
MSH4P40965 LOA1YPR139C 903 nt6.41□□□□□ -1.38
MSH4P40965 RET1YOR207C 3450 nt6.41□□□□□ -1.38
MSH4P40965 RRN3YKL125W 1884 nt6.41□□□□□ -1.38
MSH4P40965 YLR108CYLR108C 1458 nt6.41□□□□□ -1.38
MSH4P40965 VAC17YCL063W 1272 nt6.4□□□□□ -1.38
MSH4P40965 YDL034WYDL034W 345 nt6.4□□□□□ -1.38
MSH4P40965 MHR1YDR296W 681 nt6.4□□□□□ -1.38
MSH4P40965 YGL194C-AYGL194C-A 243 nt6.4□□□□□ -1.38
MSH4P40965 YGR273CYGR273C 525 nt6.4□□□□□ -1.38
MSH4P40965 YKL107WYKL107W 930 nt6.4□□□□□ -1.38
MSH4P40965 ECM1YAL059W 639 nt6.4□□□□□ -1.38
MSH4P40965 MDM12YOL009C 816 nt6.4□□□□□ -1.38
MSH4P40965 CKB2YOR039W 777 nt6.4□□□□□ -1.38
MSH4P40965 NRG2YBR066C 663 nt6.4□□□□□ -1.38
MSH4P40965 RRT2YBR246W 1164 nt6.4□□□□□ -1.38
MSH4P40965 SDA1YGR245C 2304 nt6.4□□□□□ -1.38
MSH4P40965 GIP1YBR045C 1920 nt6.4□□□□□ -1.39
MSH4P40965 SMP1YBR182C 1359 nt6.4□□□□□ -1.39
MSH4P40965 GCR2YNL199C 1605 nt6.39□□□□□ -1.39
MSH4P40965 MPP10YJR002W 1782 nt6.39□□□□□ -1.39
MSH4P40965 QDR3YBR043C 2070 nt6.39□□□□□ -1.39
MSH4P40965 snR56snR56 88 nt6.39□□□□□ -1.39
MSH4P40965 TRS23YDR246W 660 nt6.39□□□□□ -1.39
MSH4P40965 CHO1YER026C 831 nt6.39□□□□□ -1.39
MSH4P40965 RPT6YGL048C 1218 nt6.39□□□□□ -1.39
MSH4P40965 PRM10YJL108C 1152 nt6.39□□□□□ -1.39
MSH4P40965 HRT3YLR097C 1035 nt6.39□□□□□ -1.39
MSH4P40965 YLR124WYLR124W 345 nt6.39□□□□□ -1.39
MSH4P40965 YMR245WYMR245W 621 nt6.39□□□□□ -1.39
MSH4P40965 snR32snR32 188 nt6.39□□□□□ -1.39
MSH4P40965 PBI1YPL272C 1554 nt6.39□□□□□ -1.39
MSH4P40965 SMF2YHR050W 1650 nt6.39□□□□□ -1.39
MSH4P40965 TBF1YPL128C 1689 nt6.39□□□□□ -1.39
MSH4P40965 CBS2YDR197W 1170 nt6.38□□□□□ -1.39
MSH4P40965 CPR8YNR028W 927 nt6.38□□□□□ -1.39
MSH4P40965 YOL097W-AYOL097W-A 186 nt6.38□□□□□ -1.39
MSH4P40965 YPL073CYPL073C 486 nt6.38□□□□□ -1.39
MSH4P40965 BUL1YMR275C 2931 nt6.38□□□□□ -1.39
MSH4P40965 HXT7YDR342C 1713 nt6.37□□□□□ -1.39
MSH4P40965 HXT6YDR343C 1713 nt6.37□□□□□ -1.39
MSH4P40965 CLN2YPL256C 1638 nt6.37□□□□□ -1.39
MSH4P40965 RPS16BYDL083C 432 nt6.37□□□□□ -1.39
MSH4P40965 STE2YFL026W 1296 nt6.37□□□□□ -1.39
MSH4P40965 SNZ3YFL059W 897 nt6.37□□□□□ -1.39
MSH4P40965 PDE1YGL248W 1110 nt6.37□□□□□ -1.39
MSH4P40965 GRE3YHR104W 984 nt6.37□□□□□ -1.39
MSH4P40965 COS9YKL219W 1224 nt6.37□□□□□ -1.39
MSH4P40965 SNZ2YNL333W 897 nt6.37□□□□□ -1.39
MSH4P40965 YOR024WYOR024W 324 nt6.37□□□□□ -1.39
MSH4P40965 RRP36YOR287C 903 nt6.37□□□□□ -1.39
MSH4P40965 SET6YPL165C 1122 nt6.37□□□□□ -1.39
MSH4P40965 YPR027CYPR027C 834 nt6.37□□□□□ -1.39
MSH4P40965 YPR177CYPR177C 372 nt6.37□□□□□ -1.39
MSH4P40965 APA1YCL050C 966 nt6.37□□□□□ -1.39
MSH4P40965 MNN2YBR015C 1794 nt6.36□□□□□ -1.39
MSH4P40965 MID1YNL291C 1647 nt6.36□□□□□ -1.39
MSH4P40965 YDR042CYDR042C 603 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)CtN(GUU)C 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)FtN(GUU)F 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)GtN(GUU)G 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)KtN(GUU)K 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)LtN(GUU)L 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)N1tN(GUU)N1 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)N2tN(GUU)N2 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)O1tN(GUU)O1 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)O2tN(GUU)O2 74 nt6.36□□□□□ -1.39
MSH4P40965 tN(GUU)PtN(GUU)P 74 nt6.36□□□□□ -1.39
MSH4P40965 tR(ACG)JtR(ACG)J 73 nt6.36□□□□□ -1.39
MSH4P40965 ALB1YJL122W 528 nt6.36□□□□□ -1.39
MSH4P40965 GMH1YKR030W 822 nt6.36□□□□□ -1.39
MSH4P40965 COG5YNL051W 1212 nt6.36□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 49.7 ms