Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC3P40938 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC3P40938 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RFC3P40938 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.73■□□□□ 0.91
RFC3P40938 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.73■□□□□ 0.91
RFC3P40938 AC024257.2-201ENST00000549699 147 ntBASIC20.73■□□□□ 0.91
RFC3P40938 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC3P40938 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.73■□□□□ 0.91
RFC3P40938 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC3P40938 AC009102.2-201ENST00000606772 1639 ntBASIC20.73■□□□□ 0.91
RFC3P40938 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC3P40938 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.73■□□□□ 0.91
RFC3P40938 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC3P40938 AC135279.3-201ENST00000610945 1311 ntBASIC20.73■□□□□ 0.91
RFC3P40938 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RFC3P40938 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC3P40938 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC3P40938 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RFC3P40938 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.72■□□□□ 0.91
RFC3P40938 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RFC3P40938 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RFC3P40938 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RFC3P40938 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RFC3P40938 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.72■□□□□ 0.91
RFC3P40938 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFC3P40938 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.72■□□□□ 0.91
RFC3P40938 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC3P40938 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC3P40938 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFC3P40938 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC3P40938 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.71■□□□□ 0.91
RFC3P40938 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC3P40938 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFC3P40938 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.71■□□□□ 0.91
RFC3P40938 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RFC3P40938 AP003733.4-201ENST00000623785 1697 ntBASIC20.7■□□□□ 0.91
RFC3P40938 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RFC3P40938 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFC3P40938 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFC3P40938 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.7■□□□□ 0.9
RFC3P40938 AC142381.2-201ENST00000566120 298 ntBASIC20.7■□□□□ 0.9
RFC3P40938 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.7■□□□□ 0.9
RFC3P40938 AC099791.2-201ENST00000605725 427 ntBASIC20.7■□□□□ 0.9
RFC3P40938 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RFC3P40938 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC3P40938 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC3P40938 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC3P40938 AC133561.4-201ENST00000566112 224 ntBASIC20.69■□□□□ 0.9
RFC3P40938 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.69■□□□□ 0.9
RFC3P40938 AC093323.1-202ENST00000635031 2045 ntBASIC20.69■□□□□ 0.9
RFC3P40938 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFC3P40938 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RFC3P40938 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFC3P40938 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC3P40938 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC3P40938 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFC3P40938 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.68■□□□□ 0.9
RFC3P40938 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC3P40938 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
RFC3P40938 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFC3P40938 SYT6-210ENST00000641643 1587 ntBASIC20.68■□□□□ 0.9
RFC3P40938 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC3P40938 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC3P40938 AC142381.3-201ENST00000568208 1670 ntBASIC20.67■□□□□ 0.9
RFC3P40938 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RFC3P40938 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC3P40938 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFC3P40938 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC3P40938 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RFC3P40938 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.67■□□□□ 0.9
RFC3P40938 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFC3P40938 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC3P40938 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC3P40938 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC3P40938 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.66■□□□□ 0.9
RFC3P40938 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.66■□□□□ 0.9
RFC3P40938 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RFC3P40938 ALDH1A3-203ENST00000557963 1670 ntBASIC20.66■□□□□ 0.9
RFC3P40938 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFC3P40938 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RFC3P40938 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 AL031432.3-201ENST00000607698 485 ntBASIC20.65■□□□□ 0.9
RFC3P40938 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFC3P40938 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RFC3P40938 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFC3P40938 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.64■□□□□ 0.9
RFC3P40938 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms