Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC137630.3-201ENST00000607245 391 ntBASIC20.91■□□□□ 0.94
NID1P14543 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.91■□□□□ 0.94
NID1P14543 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NID1P14543 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
NID1P14543 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.9■□□□□ 0.94
NID1P14543 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NID1P14543 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NID1P14543 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NID1P14543 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NID1P14543 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NID1P14543 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NID1P14543 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NID1P14543 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NID1P14543 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
NID1P14543 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.89■□□□□ 0.93
NID1P14543 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NID1P14543 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NID1P14543 AC068473.5-201ENST00000616428 2072 ntBASIC20.89■□□□□ 0.93
NID1P14543 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NID1P14543 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NID1P14543 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NID1P14543 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NID1P14543 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NID1P14543 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.88■□□□□ 0.93
NID1P14543 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.88■□□□□ 0.93
NID1P14543 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NID1P14543 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NID1P14543 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.87■□□□□ 0.93
NID1P14543 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.87■□□□□ 0.93
NID1P14543 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.87■□□□□ 0.93
NID1P14543 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NID1P14543 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.87■□□□□ 0.93
NID1P14543 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
NID1P14543 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.87■□□□□ 0.93
NID1P14543 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.87■□□□□ 0.93
NID1P14543 Z92544.1-202ENST00000571933 1220 ntBASIC20.87■□□□□ 0.93
NID1P14543 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.87■□□□□ 0.93
NID1P14543 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NID1P14543 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.87■□□□□ 0.93
NID1P14543 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NID1P14543 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NID1P14543 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.86■□□□□ 0.93
NID1P14543 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NID1P14543 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NID1P14543 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NID1P14543 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NID1P14543 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.86■□□□□ 0.93
NID1P14543 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.86■□□□□ 0.93
NID1P14543 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.86■□□□□ 0.93
NID1P14543 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
NID1P14543 SNX5-217ENST00000606557 1087 ntBASIC20.86■□□□□ 0.93
NID1P14543 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NID1P14543 AC012676.1-201ENST00000574705 1949 ntBASIC20.86■□□□□ 0.93
NID1P14543 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NID1P14543 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NID1P14543 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NID1P14543 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.85■□□□□ 0.93
NID1P14543 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NID1P14543 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NID1P14543 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NID1P14543 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.85■□□□□ 0.93
NID1P14543 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.85■□□□□ 0.93
NID1P14543 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NID1P14543 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NID1P14543 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
NID1P14543 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NID1P14543 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NID1P14543 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.84■□□□□ 0.93
NID1P14543 DUSP8P3-201ENST00000399571 1760 ntBASIC20.84■□□□□ 0.93
NID1P14543 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NID1P14543 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NID1P14543 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.84■□□□□ 0.93
NID1P14543 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NID1P14543 AC133561.1-201ENST00000568600 2415 ntBASIC20.84■□□□□ 0.93
NID1P14543 AC021242.3-201ENST00000607598 1377 ntBASIC20.84■□□□□ 0.93
NID1P14543 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.84■□□□□ 0.93
NID1P14543 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NID1P14543 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NID1P14543 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NID1P14543 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.83■□□□□ 0.93
NID1P14543 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.83■□□□□ 0.93
NID1P14543 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.83■□□□□ 0.93
NID1P14543 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NID1P14543 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.83■□□□□ 0.93
NID1P14543 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.83■□□□□ 0.93
NID1P14543 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NID1P14543 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NID1P14543 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.82■□□□□ 0.92
NID1P14543 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.82■□□□□ 0.92
NID1P14543 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.82■□□□□ 0.92
NID1P14543 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
NID1P14543 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NID1P14543 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms