Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MIR939-201ENST00000401314 82 ntBASIC17.72■□□□□ 0.43
CD28P10747 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 AP001330.3-201ENST00000520123 633 ntBASIC17.72■□□□□ 0.43
CD28P10747 RARRES2P6-201ENST00000567333 442 ntBASIC17.72■□□□□ 0.43
CD28P10747 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.72■□□□□ 0.43
CD28P10747 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CD28P10747 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD28P10747 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD28P10747 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD28P10747 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.71■□□□□ 0.43
CD28P10747 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD28P10747 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CD28P10747 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.71■□□□□ 0.42
CD28P10747 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD28P10747 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.7■□□□□ 0.42
CD28P10747 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD28P10747 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CD28P10747 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD28P10747 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD28P10747 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD28P10747 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.7■□□□□ 0.42
CD28P10747 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.7■□□□□ 0.42
CD28P10747 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.7■□□□□ 0.42
CD28P10747 C17orf82-201ENST00000623772 1530 ntBASIC17.7■□□□□ 0.42
CD28P10747 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CD28P10747 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.7■□□□□ 0.42
CD28P10747 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CD28P10747 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
CD28P10747 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD28P10747 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD28P10747 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.69■□□□□ 0.42
CD28P10747 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD28P10747 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.69■□□□□ 0.42
CD28P10747 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
CD28P10747 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CD28P10747 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CD28P10747 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CD28P10747 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
CD28P10747 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD28P10747 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 AC091305.1-201ENST00000479476 895 ntBASIC17.68■□□□□ 0.42
CD28P10747 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.68■□□□□ 0.42
CD28P10747 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.68■□□□□ 0.42
CD28P10747 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CD28P10747 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CD28P10747 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.67■□□□□ 0.42
CD28P10747 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 AC006455.2-201ENST00000429931 906 ntBASIC17.67■□□□□ 0.42
CD28P10747 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.67■□□□□ 0.42
CD28P10747 AC008764.7-201ENST00000593779 1081 ntBASIC17.67■□□□□ 0.42
CD28P10747 AC011298.3-201ENST00000615796 283 ntBASIC17.67■□□□□ 0.42
CD28P10747 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.67■□□□□ 0.42
CD28P10747 AC241377.3-202ENST00000626088 1088 ntBASIC17.67■□□□□ 0.42
CD28P10747 AC241585.3-202ENST00000628937 1088 ntBASIC17.67■□□□□ 0.42
CD28P10747 AC245100.8-202ENST00000629247 1058 ntBASIC17.67■□□□□ 0.42
CD28P10747 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.67■□□□□ 0.42
CD28P10747 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.67■□□□□ 0.42
CD28P10747 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CD28P10747 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.67■□□□□ 0.42
CD28P10747 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.66■□□□□ 0.42
CD28P10747 AL161729.1-201ENST00000604104 1402 ntBASIC17.66■□□□□ 0.42
CD28P10747 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD28P10747 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.66■□□□□ 0.42
CD28P10747 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CD28P10747 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CD28P10747 AL138724.1-201ENST00000606771 1088 ntBASIC17.66■□□□□ 0.42
CD28P10747 CA15P2-201ENST00000611168 834 ntBASIC17.66■□□□□ 0.42
CD28P10747 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.66■□□□□ 0.42
CD28P10747 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.66■□□□□ 0.42
CD28P10747 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.66■□□□□ 0.42
CD28P10747 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CD28P10747 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD28P10747 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD28P10747 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CD28P10747 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CD28P10747 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD28P10747 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CD28P10747 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.65■□□□□ 0.42
CD28P10747 AC026271.2-201ENST00000428091 497 ntBASIC17.65■□□□□ 0.42
CD28P10747 AC009086.3-201ENST00000623486 1008 ntBASIC17.65■□□□□ 0.42
CD28P10747 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CD28P10747 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms