Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 RDL2YOR286W 450 nt4.26□□□□□ -1.73
RPL40AP0CH08 YDC1YPL087W 954 nt4.26□□□□□ -1.73
RPL40AP0CH08 YPR059CYPR059C 387 nt4.26□□□□□ -1.73
RPL40AP0CH08 YCL021W-AYCL021W-A 378 nt4.26□□□□□ -1.73
RPL40AP0CH08 BUD22YMR014W 1560 nt4.26□□□□□ -1.73
RPL40AP0CH08 PBS2YJL128C 2007 nt4.25□□□□□ -1.73
RPL40AP0CH08 CNB1YKL190W 528 nt4.25□□□□□ -1.73
RPL40AP0CH08 ILV5YLR355C 1188 nt4.25□□□□□ -1.73
RPL40AP0CH08 RRP3YHR065C 1506 nt4.25□□□□□ -1.73
RPL40AP0CH08 CMR1YDL156W 1569 nt4.24□□□□□ -1.73
RPL40AP0CH08 YDR090CYDR090C 933 nt4.24□□□□□ -1.73
RPL40AP0CH08 YKL023WYKL023W 834 nt4.24□□□□□ -1.73
RPL40AP0CH08 YPL245WYPL245W 1365 nt4.24□□□□□ -1.73
RPL40AP0CH08 CPS1YJL172W 1731 nt4.24□□□□□ -1.73
RPL40AP0CH08 CDC16YKL022C 2523 nt4.23□□□□□ -1.73
RPL40AP0CH08 AAD10YJR155W 867 nt4.23□□□□□ -1.73
RPL40AP0CH08 MRPL3YMR024W 1173 nt4.23□□□□□ -1.73
RPL40AP0CH08 ZPS1YOL154W 750 nt4.23□□□□□ -1.73
RPL40AP0CH08 SPS22YCL048W 1392 nt4.23□□□□□ -1.73
RPL40AP0CH08 HXT7YDR342C 1713 nt4.23□□□□□ -1.73
RPL40AP0CH08 HXT6YDR343C 1713 nt4.23□□□□□ -1.73
RPL40AP0CH08 CLA4YNL298W 2529 nt4.23□□□□□ -1.73
RPL40AP0CH08 IMD3YLR432W 1572 nt4.23□□□□□ -1.73
RPL40AP0CH08 VID22YLR373C 2706 nt4.23□□□□□ -1.73
RPL40AP0CH08 BOP2YLR267W 1713 nt4.22□□□□□ -1.73
RPL40AP0CH08 AIR2YDL175C 1035 nt4.22□□□□□ -1.73
RPL40AP0CH08 APA2YDR530C 978 nt4.22□□□□□ -1.73
RPL40AP0CH08 RRP46YGR095C 672 nt4.22□□□□□ -1.73
RPL40AP0CH08 MNN11YJL183W 1269 nt4.22□□□□□ -1.73
RPL40AP0CH08 CPR6YLR216C 1116 nt4.22□□□□□ -1.73
RPL40AP0CH08 TRS33YOR115C 807 nt4.22□□□□□ -1.73
RPL40AP0CH08 ADY3YDL239C 2373 nt4.22□□□□□ -1.73
RPL40AP0CH08 CBF5YLR175W 1452 nt4.22□□□□□ -1.73
RPL40AP0CH08 PRP43YGL120C 2304 nt4.22□□□□□ -1.73
RPL40AP0CH08 YDR261C-DYDR261C-D 4815 nt4.21□□□□□ -1.74
RPL40AP0CH08 MCM2YBL023C 2607 nt4.21□□□□□ -1.74
RPL40AP0CH08 GCV1YDR019C 1203 nt4.21□□□□□ -1.74
RPL40AP0CH08 YPR174CYPR174C 666 nt4.21□□□□□ -1.74
RPL40AP0CH08 SSL1YLR005W 1386 nt4.21□□□□□ -1.74
RPL40AP0CH08 TOS3YGL179C 1683 nt4.21□□□□□ -1.74
RPL40AP0CH08 SRP101YDR292C 1866 nt4.21□□□□□ -1.74
RPL40AP0CH08 RAD30YDR419W 1899 nt4.21□□□□□ -1.74
RPL40AP0CH08 KAP114YGL241W 3015 nt4.21□□□□□ -1.74
RPL40AP0CH08 ASA1YPR085C 1332 nt4.21□□□□□ -1.74
RPL40AP0CH08 AVO1YOL078W 3531 nt4.2□□□□□ -1.74
RPL40AP0CH08 APC4YDR118W 1959 nt4.2□□□□□ -1.74
RPL40AP0CH08 TFB3YDR460W 966 nt4.2□□□□□ -1.74
RPL40AP0CH08 RPL34AYER056C-A 366 nt4.2□□□□□ -1.74
RPL40AP0CH08 MAD2YJL030W 591 nt4.2□□□□□ -1.74
RPL40AP0CH08 TFB4YPR056W 1017 nt4.2□□□□□ -1.74
RPL40AP0CH08 GMC1YDR506C 1827 nt4.2□□□□□ -1.74
RPL40AP0CH08 BLM10YFL007W 6432 nt4.2□□□□□ -1.74
RPL40AP0CH08 SKG3YLR187W 3081 nt4.19□□□□□ -1.74
RPL40AP0CH08 PDR16YNL231C 1056 nt4.19□□□□□ -1.74
RPL40AP0CH08 YBR126W-AYBR126W-A 207 nt4.19□□□□□ -1.74
RPL40AP0CH08 RIA1YNL163C 3333 nt4.19□□□□□ -1.74
RPL40AP0CH08 VHC1YBR235W 3363 nt4.19□□□□□ -1.74
RPL40AP0CH08 DDC1YPL194W 1839 nt4.18□□□□□ -1.74
RPL40AP0CH08 MET12YPL023C 1974 nt4.18□□□□□ -1.74
RPL40AP0CH08 THS1YIL078W 2205 nt4.18□□□□□ -1.74
RPL40AP0CH08 FAP1YNL023C 2898 nt4.18□□□□□ -1.74
RPL40AP0CH08 ALG6YOR002W 1635 nt4.18□□□□□ -1.74
RPL40AP0CH08 KAR2YJL034W 2049 nt4.18□□□□□ -1.74
RPL40AP0CH08 GAD1YMR250W 1758 nt4.18□□□□□ -1.74
RPL40AP0CH08 YDL228CYDL228C 642 nt4.18□□□□□ -1.74
RPL40AP0CH08 COQ4YDR204W 1008 nt4.18□□□□□ -1.74
RPL40AP0CH08 YER145C-AYER145C-A 438 nt4.18□□□□□ -1.74
RPL40AP0CH08 YGL072CYGL072C 360 nt4.18□□□□□ -1.74
RPL40AP0CH08 YIL165CYIL165C 360 nt4.18□□□□□ -1.74
RPL40AP0CH08 RPL22AYLR061W 366 nt4.18□□□□□ -1.74
RPL40AP0CH08 PLP2YOR281C 861 nt4.18□□□□□ -1.74
RPL40AP0CH08 MDR1YGR100W 2853 nt4.18□□□□□ -1.74
RPL40AP0CH08 YDR193WYDR193W 399 nt4.17□□□□□ -1.74
RPL40AP0CH08 IRC22YEL001C 678 nt4.17□□□□□ -1.74
RPL40AP0CH08 GTT1YIR038C 705 nt4.17□□□□□ -1.74
RPL40AP0CH08 AIM26YKL037W 357 nt4.17□□□□□ -1.74
RPL40AP0CH08 YML057C-AYML057C-A 390 nt4.17□□□□□ -1.74
RPL40AP0CH08 YIM1YMR152W 1098 nt4.17□□□□□ -1.74
RPL40AP0CH08 SLZ1YNL196C 897 nt4.17□□□□□ -1.74
RPL40AP0CH08 YPL077CYPL077C 723 nt4.17□□□□□ -1.74
RPL40AP0CH08 PCA1YBR295W 3651 nt4.17□□□□□ -1.74
RPL40AP0CH08 TUB3YML124C 1338 nt4.17□□□□□ -1.74
RPL40AP0CH08 FRS1YLR060W 1788 nt4.17□□□□□ -1.74
RPL40AP0CH08 KRE29YER038C 1395 nt4.16□□□□□ -1.74
RPL40AP0CH08 VMS1YDR049W 1899 nt4.16□□□□□ -1.74
RPL40AP0CH08 SUL2YLR092W 2682 nt4.16□□□□□ -1.74
RPL40AP0CH08 EUG1YDR518W 1554 nt4.16□□□□□ -1.74
RPL40AP0CH08 YDR230WYDR230W 348 nt4.16□□□□□ -1.74
RPL40AP0CH08 YGR066CYGR066C 879 nt4.16□□□□□ -1.74
RPL40AP0CH08 PMA1YGL008C 2757 nt4.16□□□□□ -1.74
RPL40AP0CH08 CCZ1YBR131W 2115 nt4.16□□□□□ -1.74
RPL40AP0CH08 YMR102CYMR102C 2505 nt4.16□□□□□ -1.74
RPL40AP0CH08 SEC39YLR440C 2130 nt4.15□□□□□ -1.74
RPL40AP0CH08 HSP82YPL240C 2130 nt4.15□□□□□ -1.74
RPL40AP0CH08 RPS14AYCR031C 414 nt4.15□□□□□ -1.75
RPL40AP0CH08 PEX19YDL065C 1029 nt4.15□□□□□ -1.75
RPL40AP0CH08 SOH1YGL127C 384 nt4.15□□□□□ -1.75
RPL40AP0CH08 YGR153WYGR153W 654 nt4.15□□□□□ -1.75
RPL40AP0CH08 MIC26YGR235C 702 nt4.15□□□□□ -1.75
RPL40AP0CH08 YJL215CYJL215C 360 nt4.15□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms