Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI1O95970 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.96■□□□□ 0.95
LGI1O95970 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.96■□□□□ 0.95
LGI1O95970 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.96■□□□□ 0.95
LGI1O95970 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LGI1O95970 KRT18P24-201ENST00000344739 1156 ntBASIC20.95■□□□□ 0.94
LGI1O95970 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LGI1O95970 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LGI1O95970 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LGI1O95970 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LGI1O95970 AC010980.1-201ENST00000587192 1142 ntBASIC20.95■□□□□ 0.94
LGI1O95970 PVT1_1.1-201ENST00000615125 194 ntBASIC20.95■□□□□ 0.94
LGI1O95970 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LGI1O95970 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.95■□□□□ 0.94
LGI1O95970 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.95■□□□□ 0.94
LGI1O95970 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LGI1O95970 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI1O95970 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 AF131216.4-201ENST00000638924 1588 ntBASIC20.93■□□□□ 0.94
LGI1O95970 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LGI1O95970 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
LGI1O95970 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LGI1O95970 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LGI1O95970 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
LGI1O95970 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.93■□□□□ 0.94
LGI1O95970 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.93■□□□□ 0.94
LGI1O95970 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.93■□□□□ 0.94
LGI1O95970 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI1O95970 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LGI1O95970 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.92■□□□□ 0.94
LGI1O95970 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LGI1O95970 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LGI1O95970 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LGI1O95970 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LGI1O95970 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.91■□□□□ 0.94
LGI1O95970 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LGI1O95970 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LGI1O95970 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LGI1O95970 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LGI1O95970 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.91■□□□□ 0.94
LGI1O95970 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.9■□□□□ 0.94
LGI1O95970 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.9■□□□□ 0.94
LGI1O95970 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.9■□□□□ 0.94
LGI1O95970 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.9■□□□□ 0.94
LGI1O95970 MIR4281-201ENST00000580852 62 ntBASIC20.9■□□□□ 0.94
LGI1O95970 THA1P-201ENST00000590384 1145 ntBASIC20.9■□□□□ 0.94
LGI1O95970 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LGI1O95970 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LGI1O95970 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LGI1O95970 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LGI1O95970 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LGI1O95970 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI1O95970 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LGI1O95970 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI1O95970 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI1O95970 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LGI1O95970 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI1O95970 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.88■□□□□ 0.93
LGI1O95970 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LGI1O95970 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.88■□□□□ 0.93
LGI1O95970 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.88■□□□□ 0.93
LGI1O95970 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LGI1O95970 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LGI1O95970 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.88■□□□□ 0.93
LGI1O95970 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LGI1O95970 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.88■□□□□ 0.93
LGI1O95970 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
LGI1O95970 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LGI1O95970 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LGI1O95970 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms