Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC092028.1-203ENST00000608262 953 ntBASIC20.31■□□□□ 0.84
UPK3AO75631 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPK3AO75631 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
UPK3AO75631 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPK3AO75631 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPK3AO75631 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.31■□□□□ 0.84
UPK3AO75631 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPK3AO75631 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UPK3AO75631 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 AL161729.1-201ENST00000604104 1402 ntBASIC20.3■□□□□ 0.84
UPK3AO75631 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.3■□□□□ 0.84
UPK3AO75631 SNX5-217ENST00000606557 1087 ntBASIC20.3■□□□□ 0.84
UPK3AO75631 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.3■□□□□ 0.84
UPK3AO75631 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
UPK3AO75631 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.3■□□□□ 0.84
UPK3AO75631 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UPK3AO75631 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK3AO75631 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK3AO75631 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK3AO75631 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK3AO75631 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UPK3AO75631 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.29■□□□□ 0.84
UPK3AO75631 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK3AO75631 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.29■□□□□ 0.84
UPK3AO75631 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.29■□□□□ 0.84
UPK3AO75631 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.29■□□□□ 0.84
UPK3AO75631 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPK3AO75631 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.28■□□□□ 0.84
UPK3AO75631 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.28■□□□□ 0.84
UPK3AO75631 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.28■□□□□ 0.84
UPK3AO75631 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.28■□□□□ 0.84
UPK3AO75631 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UPK3AO75631 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.28■□□□□ 0.84
UPK3AO75631 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.28■□□□□ 0.84
UPK3AO75631 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPK3AO75631 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
UPK3AO75631 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UPK3AO75631 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.27■□□□□ 0.84
UPK3AO75631 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.27■□□□□ 0.84
UPK3AO75631 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
UPK3AO75631 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UPK3AO75631 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UPK3AO75631 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UPK3AO75631 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPK3AO75631 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
UPK3AO75631 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UPK3AO75631 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.26■□□□□ 0.83
UPK3AO75631 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK3AO75631 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK3AO75631 GUSBP5-201ENST00000418136 578 ntBASIC20.26■□□□□ 0.83
UPK3AO75631 TSPY9P-201ENST00000440215 945 ntBASIC20.26■□□□□ 0.83
UPK3AO75631 TSPY11P-201ENST00000442607 1045 ntBASIC20.26■□□□□ 0.83
UPK3AO75631 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.26■□□□□ 0.83
UPK3AO75631 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPK3AO75631 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK3AO75631 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPK3AO75631 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UPK3AO75631 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UPK3AO75631 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.25■□□□□ 0.83
UPK3AO75631 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UPK3AO75631 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.25■□□□□ 0.83
UPK3AO75631 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3AO75631 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
UPK3AO75631 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.25■□□□□ 0.83
UPK3AO75631 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
UPK3AO75631 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3AO75631 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3AO75631 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.25■□□□□ 0.83
UPK3AO75631 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3AO75631 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UPK3AO75631 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.24■□□□□ 0.83
UPK3AO75631 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UPK3AO75631 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
UPK3AO75631 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.24■□□□□ 0.83
UPK3AO75631 AC079834.2-201ENST00000609776 1949 ntBASIC20.24■□□□□ 0.83
UPK3AO75631 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms