Protein–RNA interactions for Protein: O43759

SYNGR1, Synaptogyrin-1, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1O43759 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SYNGR1O43759 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGR1O43759 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.27■□□□□ 0.68
SYNGR1O43759 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.27■□□□□ 0.68
SYNGR1O43759 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.27■□□□□ 0.68
SYNGR1O43759 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGR1O43759 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.27■□□□□ 0.68
SYNGR1O43759 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SYNGR1O43759 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGR1O43759 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGR1O43759 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SYNGR1O43759 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNGR1O43759 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNGR1O43759 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNGR1O43759 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SYNGR1O43759 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SYNGR1O43759 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGR1O43759 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.26■□□□□ 0.67
SYNGR1O43759 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.26■□□□□ 0.67
SYNGR1O43759 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNGR1O43759 SNX5-217ENST00000606557 1087 ntBASIC19.26■□□□□ 0.67
SYNGR1O43759 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.26■□□□□ 0.67
SYNGR1O43759 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SYNGR1O43759 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGR1O43759 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNGR1O43759 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.25■□□□□ 0.67
SYNGR1O43759 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGR1O43759 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNGR1O43759 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGR1O43759 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.25■□□□□ 0.67
SYNGR1O43759 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.25■□□□□ 0.67
SYNGR1O43759 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGR1O43759 C9orf163-202ENST00000624034 2573 ntBASIC19.25■□□□□ 0.67
SYNGR1O43759 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SYNGR1O43759 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SYNGR1O43759 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGR1O43759 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGR1O43759 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGR1O43759 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.24■□□□□ 0.67
SYNGR1O43759 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.24■□□□□ 0.67
SYNGR1O43759 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGR1O43759 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGR1O43759 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNGR1O43759 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.24■□□□□ 0.67
SYNGR1O43759 AC133561.1-201ENST00000568600 2415 ntBASIC19.23■□□□□ 0.67
SYNGR1O43759 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNGR1O43759 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SYNGR1O43759 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNGR1O43759 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNGR1O43759 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNGR1O43759 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SYNGR1O43759 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGR1O43759 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGR1O43759 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SYNGR1O43759 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
SYNGR1O43759 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGR1O43759 BX664725.1-201ENST00000438252 379 ntBASIC19.22■□□□□ 0.67
SYNGR1O43759 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNGR1O43759 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNGR1O43759 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNGR1O43759 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.22■□□□□ 0.67
SYNGR1O43759 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
SYNGR1O43759 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGR1O43759 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGR1O43759 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNGR1O43759 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNGR1O43759 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SYNGR1O43759 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
SYNGR1O43759 AC068473.5-201ENST00000616428 2072 ntBASIC19.21■□□□□ 0.67
SYNGR1O43759 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 AC021242.3-201ENST00000607598 1377 ntBASIC19.21■□□□□ 0.67
SYNGR1O43759 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNGR1O43759 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNGR1O43759 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SYNGR1O43759 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.21■□□□□ 0.67
SYNGR1O43759 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SYNGR1O43759 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNGR1O43759 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SYNGR1O43759 AC092068.2-201ENST00000590491 1708 ntBASIC19.2■□□□□ 0.66
SYNGR1O43759 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNGR1O43759 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNGR1O43759 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SYNGR1O43759 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SYNGR1O43759 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNGR1O43759 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SYNGR1O43759 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms